Protein–RNA interactions for Protein: Q91YR7

Prpf6, Pre-mRNA-processing factor 6, mousemouse

Known RBP Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf6Q91YR7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf6Q91YR7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf6Q91YR7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Prpf6Q91YR7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf6Q91YR7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf6Q91YR7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.16■□□□□ 0.98
Prpf6Q91YR7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Prpf6Q91YR7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.16■□□□□ 0.98
Prpf6Q91YR7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf6Q91YR7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Prpf6Q91YR7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf6Q91YR7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf6Q91YR7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf6Q91YR7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf6Q91YR7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.15■□□□□ 0.98
Prpf6Q91YR7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf6Q91YR7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Prpf6Q91YR7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf6Q91YR7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf6Q91YR7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf6Q91YR7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf6Q91YR7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf6Q91YR7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf6Q91YR7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf6Q91YR7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.14■□□□□ 0.97
Prpf6Q91YR7 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.14■□□□□ 0.97
Prpf6Q91YR7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf6Q91YR7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf6Q91YR7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf6Q91YR7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf6Q91YR7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf6Q91YR7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf6Q91YR7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.13■□□□□ 0.97
Prpf6Q91YR7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.13■□□□□ 0.97
Prpf6Q91YR7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf6Q91YR7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf6Q91YR7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Prpf6Q91YR7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf6Q91YR7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf6Q91YR7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf6Q91YR7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf6Q91YR7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf6Q91YR7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf6Q91YR7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf6Q91YR7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf6Q91YR7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.12■□□□□ 0.97
Prpf6Q91YR7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf6Q91YR7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf6Q91YR7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf6Q91YR7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.12■□□□□ 0.97
Prpf6Q91YR7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf6Q91YR7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf6Q91YR7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf6Q91YR7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf6Q91YR7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf6Q91YR7 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.11■□□□□ 0.97
Prpf6Q91YR7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf6Q91YR7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf6Q91YR7 Gm43060-201ENSMUST00000200621 289 ntBASIC21.1■□□□□ 0.97
Prpf6Q91YR7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.1■□□□□ 0.97
Prpf6Q91YR7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf6Q91YR7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf6Q91YR7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Prpf6Q91YR7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf6Q91YR7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf6Q91YR7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf6Q91YR7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf6Q91YR7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.09■□□□□ 0.97
Prpf6Q91YR7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.09■□□□□ 0.97
Prpf6Q91YR7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Prpf6Q91YR7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf6Q91YR7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf6Q91YR7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf6Q91YR7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Prpf6Q91YR7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Prpf6Q91YR7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf6Q91YR7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf6Q91YR7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Prpf6Q91YR7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Prpf6Q91YR7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.08■□□□□ 0.97
Prpf6Q91YR7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf6Q91YR7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf6Q91YR7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms