Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha1Q91Y21 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha1Q91Y21 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha1Q91Y21 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha1Q91Y21 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha1Q91Y21 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdha1Q91Y21 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdha1Q91Y21 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pcdha1Q91Y21 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Golph3-202ENSMUST00000226517 2359 ntBASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha1Q91Y21 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha1Q91Y21 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha1Q91Y21 AA386476-201ENSMUST00000098781 1665 ntBASIC20.04■□□□□ 0.8
Pcdha1Q91Y21 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha1Q91Y21 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.04■□□□□ 0.8
Pcdha1Q91Y21 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha1Q91Y21 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha1Q91Y21 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha1Q91Y21 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha1Q91Y21 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdha1Q91Y21 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha1Q91Y21 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha1Q91Y21 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdha1Q91Y21 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdha1Q91Y21 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha1Q91Y21 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha1Q91Y21 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha1Q91Y21 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha1Q91Y21 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha1Q91Y21 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha1Q91Y21 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Pcdha1Q91Y21 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha1Q91Y21 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Pcdha1Q91Y21 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.02■□□□□ 0.8
Pcdha1Q91Y21 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha1Q91Y21 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha1Q91Y21 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha1Q91Y21 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha1Q91Y21 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha1Q91Y21 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha1Q91Y21 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
Pcdha1Q91Y21 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha1Q91Y21 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha1Q91Y21 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdha1Q91Y21 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha1Q91Y21 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha1Q91Y21 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Pcdha1Q91Y21 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha1Q91Y21 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha1Q91Y21 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha1Q91Y21 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20■□□□□ 0.79
Pcdha1Q91Y21 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha1Q91Y21 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha1Q91Y21 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha1Q91Y21 Ap3s1-204ENSMUST00000225520 957 ntBASIC20■□□□□ 0.79
Pcdha1Q91Y21 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha1Q91Y21 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha1Q91Y21 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha1Q91Y21 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha1Q91Y21 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdha1Q91Y21 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha1Q91Y21 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha1Q91Y21 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha1Q91Y21 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdha1Q91Y21 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.98■□□□□ 0.79
Pcdha1Q91Y21 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha1Q91Y21 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha1Q91Y21 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha1Q91Y21 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha1Q91Y21 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Pcdha1Q91Y21 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha1Q91Y21 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha1Q91Y21 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha1Q91Y21 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha1Q91Y21 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha1Q91Y21 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha1Q91Y21 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Pcdha1Q91Y21 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha1Q91Y21 Gm7514-201ENSMUST00000209475 934 ntBASIC19.97■□□□□ 0.79
Pcdha1Q91Y21 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha1Q91Y21 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha1Q91Y21 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms