Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pcdha3Q91Y16 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha3Q91Y16 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdha3Q91Y16 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.06■□□□□ 0.8
Pcdha3Q91Y16 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdha3Q91Y16 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdha3Q91Y16 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.05■□□□□ 0.8
Pcdha3Q91Y16 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.05■□□□□ 0.8
Pcdha3Q91Y16 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha3Q91Y16 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha3Q91Y16 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha3Q91Y16 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha3Q91Y16 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha3Q91Y16 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha3Q91Y16 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha3Q91Y16 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.04■□□□□ 0.8
Pcdha3Q91Y16 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.04■□□□□ 0.8
Pcdha3Q91Y16 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha3Q91Y16 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha3Q91Y16 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha3Q91Y16 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcdha3Q91Y16 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha3Q91Y16 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha3Q91Y16 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha3Q91Y16 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdha3Q91Y16 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha3Q91Y16 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdha3Q91Y16 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdha3Q91Y16 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha3Q91Y16 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha3Q91Y16 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.03■□□□□ 0.8
Pcdha3Q91Y16 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Gm18284-201ENSMUST00000172604 624 ntBASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha3Q91Y16 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha3Q91Y16 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha3Q91Y16 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha3Q91Y16 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
Pcdha3Q91Y16 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha3Q91Y16 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha3Q91Y16 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdha3Q91Y16 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdha3Q91Y16 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha3Q91Y16 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha3Q91Y16 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pcdha3Q91Y16 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha3Q91Y16 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha3Q91Y16 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha3Q91Y16 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcdha3Q91Y16 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20■□□□□ 0.79
Pcdha3Q91Y16 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Pcdha3Q91Y16 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha3Q91Y16 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha3Q91Y16 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha3Q91Y16 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha3Q91Y16 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha3Q91Y16 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha3Q91Y16 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha3Q91Y16 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 Gm27801-201ENSMUST00000184174 223 ntBASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 Gm8495-201ENSMUST00000188740 694 ntBASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha3Q91Y16 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pcdha3Q91Y16 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdha3Q91Y16 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha3Q91Y16 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha3Q91Y16 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pcdha3Q91Y16 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha3Q91Y16 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdha3Q91Y16 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha3Q91Y16 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Pcdha3Q91Y16 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha3Q91Y16 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms