Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb22Q91XZ8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.49■■□□□ 1.19
Pcdhb22Q91XZ8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb22Q91XZ8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb22Q91XZ8 Gm10493-201ENSMUST00000097270 612 ntBASIC22.49■■□□□ 1.19
Pcdhb22Q91XZ8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb22Q91XZ8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb22Q91XZ8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb22Q91XZ8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Pcdhb22Q91XZ8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb22Q91XZ8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb22Q91XZ8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Pcdhb22Q91XZ8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.48■■□□□ 1.19
Pcdhb22Q91XZ8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb22Q91XZ8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Pcdhb22Q91XZ8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb22Q91XZ8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb22Q91XZ8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb22Q91XZ8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb22Q91XZ8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb22Q91XZ8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb22Q91XZ8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb22Q91XZ8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb22Q91XZ8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb22Q91XZ8 Gm7860-201ENSMUST00000121190 879 ntBASIC22.47■■□□□ 1.19
Pcdhb22Q91XZ8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb22Q91XZ8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb22Q91XZ8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Pcdhb22Q91XZ8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Pcdhb22Q91XZ8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb22Q91XZ8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb22Q91XZ8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.46■■□□□ 1.19
Pcdhb22Q91XZ8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
Pcdhb22Q91XZ8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb22Q91XZ8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb22Q91XZ8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb22Q91XZ8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb22Q91XZ8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb22Q91XZ8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb22Q91XZ8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb22Q91XZ8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb22Q91XZ8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb22Q91XZ8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb22Q91XZ8 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.45■■□□□ 1.18
Pcdhb22Q91XZ8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb22Q91XZ8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.45■■□□□ 1.18
Pcdhb22Q91XZ8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb22Q91XZ8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 Gm9988-201ENSMUST00000069786 435 ntBASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb22Q91XZ8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb22Q91XZ8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb22Q91XZ8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb22Q91XZ8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
Pcdhb22Q91XZ8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.43■■□□□ 1.18
Pcdhb22Q91XZ8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb22Q91XZ8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb22Q91XZ8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Pcdhb22Q91XZ8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.42■■□□□ 1.18
Pcdhb22Q91XZ8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb22Q91XZ8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.42■■□□□ 1.18
Pcdhb22Q91XZ8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Pcdhb22Q91XZ8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb22Q91XZ8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Pcdhb22Q91XZ8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb22Q91XZ8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb22Q91XZ8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb22Q91XZ8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb22Q91XZ8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb22Q91XZ8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.41■■□□□ 1.18
Pcdhb22Q91XZ8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb22Q91XZ8 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.41■■□□□ 1.18
Pcdhb22Q91XZ8 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.41■■□□□ 1.18
Pcdhb22Q91XZ8 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.41■■□□□ 1.18
Pcdhb22Q91XZ8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
Pcdhb22Q91XZ8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb22Q91XZ8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb22Q91XZ8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb22Q91XZ8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb22Q91XZ8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb22Q91XZ8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb22Q91XZ8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb22Q91XZ8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb22Q91XZ8 Gm18284-201ENSMUST00000172604 624 ntBASIC22.4■■□□□ 1.18
Pcdhb22Q91XZ8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.4■■□□□ 1.18
Pcdhb22Q91XZ8 Gm38205-201ENSMUST00000192243 258 ntBASIC22.4■■□□□ 1.18
Pcdhb22Q91XZ8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms