Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga11Q91XY8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga11Q91XY8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhga11Q91XY8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga11Q91XY8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga11Q91XY8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga11Q91XY8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga11Q91XY8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhga11Q91XY8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga11Q91XY8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.44■□□□□ 0.54
Pcdhga11Q91XY8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhga11Q91XY8 Serp2-204ENSMUST00000228055 705 ntBASIC18.44■□□□□ 0.54
Pcdhga11Q91XY8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdhga11Q91XY8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga11Q91XY8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga11Q91XY8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga11Q91XY8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga11Q91XY8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga11Q91XY8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga11Q91XY8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.43■□□□□ 0.54
Pcdhga11Q91XY8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga11Q91XY8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga11Q91XY8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga11Q91XY8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga11Q91XY8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhga11Q91XY8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.42■□□□□ 0.54
Pcdhga11Q91XY8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga11Q91XY8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga11Q91XY8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga11Q91XY8 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.42■□□□□ 0.54
Pcdhga11Q91XY8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.42■□□□□ 0.54
Pcdhga11Q91XY8 Spcs1-204ENSMUST00000226782 949 ntBASIC18.42■□□□□ 0.54
Pcdhga11Q91XY8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhga11Q91XY8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga11Q91XY8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Pcdhga11Q91XY8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga11Q91XY8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhga11Q91XY8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga11Q91XY8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhga11Q91XY8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga11Q91XY8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga11Q91XY8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga11Q91XY8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga11Q91XY8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga11Q91XY8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdhga11Q91XY8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga11Q91XY8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga11Q91XY8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhga11Q91XY8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga11Q91XY8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga11Q91XY8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga11Q91XY8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga11Q91XY8 Gm43137-201ENSMUST00000198052 594 ntBASIC18.4■□□□□ 0.54
Pcdhga11Q91XY8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcdhga11Q91XY8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdhga11Q91XY8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga11Q91XY8 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.4■□□□□ 0.54
Pcdhga11Q91XY8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga11Q91XY8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga11Q91XY8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga11Q91XY8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga11Q91XY8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga11Q91XY8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga11Q91XY8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga11Q91XY8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhga11Q91XY8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhga11Q91XY8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhga11Q91XY8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga11Q91XY8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga11Q91XY8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga11Q91XY8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga11Q91XY8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdhga11Q91XY8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga11Q91XY8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga11Q91XY8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhga11Q91XY8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhga11Q91XY8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga11Q91XY8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga11Q91XY8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.38■□□□□ 0.53
Pcdhga11Q91XY8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga11Q91XY8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga11Q91XY8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga11Q91XY8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga11Q91XY8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga11Q91XY8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms