Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhga4Q91XY4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga4Q91XY4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhga4Q91XY4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga4Q91XY4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga4Q91XY4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhga4Q91XY4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga4Q91XY4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhga4Q91XY4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga4Q91XY4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga4Q91XY4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga4Q91XY4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.8■□□□□ 0.6
Pcdhga4Q91XY4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga4Q91XY4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga4Q91XY4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga4Q91XY4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhga4Q91XY4 Gm10493-201ENSMUST00000097270 612 ntBASIC18.79■□□□□ 0.6
Pcdhga4Q91XY4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhga4Q91XY4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdhga4Q91XY4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga4Q91XY4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga4Q91XY4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhga4Q91XY4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga4Q91XY4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga4Q91XY4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga4Q91XY4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhga4Q91XY4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhga4Q91XY4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhga4Q91XY4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga4Q91XY4 Gm5874-201ENSMUST00000096101 508 ntBASIC18.78■□□□□ 0.6
Pcdhga4Q91XY4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga4Q91XY4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga4Q91XY4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhga4Q91XY4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhga4Q91XY4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga4Q91XY4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga4Q91XY4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.77■□□□□ 0.6
Pcdhga4Q91XY4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.77■□□□□ 0.6
Pcdhga4Q91XY4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga4Q91XY4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga4Q91XY4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga4Q91XY4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga4Q91XY4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.77■□□□□ 0.59
Pcdhga4Q91XY4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhga4Q91XY4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdhga4Q91XY4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga4Q91XY4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga4Q91XY4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhga4Q91XY4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga4Q91XY4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga4Q91XY4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga4Q91XY4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Pcdhga4Q91XY4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhga4Q91XY4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.76■□□□□ 0.59
Pcdhga4Q91XY4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga4Q91XY4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhga4Q91XY4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga4Q91XY4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga4Q91XY4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga4Q91XY4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga4Q91XY4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga4Q91XY4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga4Q91XY4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga4Q91XY4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga4Q91XY4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga4Q91XY4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga4Q91XY4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga4Q91XY4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga4Q91XY4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga4Q91XY4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga4Q91XY4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga4Q91XY4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga4Q91XY4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhga4Q91XY4 Gm27801-201ENSMUST00000184174 223 ntBASIC18.73■□□□□ 0.59
Pcdhga4Q91XY4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhga4Q91XY4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga4Q91XY4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga4Q91XY4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga4Q91XY4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhga4Q91XY4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga4Q91XY4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga4Q91XY4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhga4Q91XY4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms