Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb1Q91XX8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb1Q91XX8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb1Q91XX8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb1Q91XX8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhgb1Q91XX8 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.99■□□□□ 0.79
Pcdhgb1Q91XX8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb1Q91XX8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdhgb1Q91XX8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhgb1Q91XX8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhgb1Q91XX8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.98■□□□□ 0.79
Pcdhgb1Q91XX8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhgb1Q91XX8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhgb1Q91XX8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhgb1Q91XX8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhgb1Q91XX8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhgb1Q91XX8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.97■□□□□ 0.79
Pcdhgb1Q91XX8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhgb1Q91XX8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Pcdhgb1Q91XX8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhgb1Q91XX8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.97■□□□□ 0.79
Pcdhgb1Q91XX8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Pcdhgb1Q91XX8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Pcdhgb1Q91XX8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhgb1Q91XX8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhgb1Q91XX8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhgb1Q91XX8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhgb1Q91XX8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhgb1Q91XX8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.96■□□□□ 0.79
Pcdhgb1Q91XX8 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.96■□□□□ 0.79
Pcdhgb1Q91XX8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhgb1Q91XX8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhgb1Q91XX8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhgb1Q91XX8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhgb1Q91XX8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.96■□□□□ 0.79
Pcdhgb1Q91XX8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Pcdhgb1Q91XX8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhgb1Q91XX8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhgb1Q91XX8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Pcdhgb1Q91XX8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.95■□□□□ 0.78
Pcdhgb1Q91XX8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhgb1Q91XX8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhgb1Q91XX8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhgb1Q91XX8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhgb1Q91XX8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.95■□□□□ 0.78
Pcdhgb1Q91XX8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhgb1Q91XX8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhgb1Q91XX8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhgb1Q91XX8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhgb1Q91XX8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhgb1Q91XX8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhgb1Q91XX8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhgb1Q91XX8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhgb1Q91XX8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhgb1Q91XX8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.94■□□□□ 0.78
Pcdhgb1Q91XX8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhgb1Q91XX8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhgb1Q91XX8 Gm38205-201ENSMUST00000192243 258 ntBASIC19.94■□□□□ 0.78
Pcdhgb1Q91XX8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhgb1Q91XX8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.94■□□□□ 0.78
Pcdhgb1Q91XX8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.94■□□□□ 0.78
Pcdhgb1Q91XX8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhgb1Q91XX8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhgb1Q91XX8 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 Gm7514-201ENSMUST00000209475 934 ntBASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Pcdhgb1Q91XX8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhgb1Q91XX8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhgb1Q91XX8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhgb1Q91XX8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhgb1Q91XX8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.92■□□□□ 0.78
Pcdhgb1Q91XX8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhgb1Q91XX8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhgb1Q91XX8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhgb1Q91XX8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhgb1Q91XX8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhgb1Q91XX8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhgb1Q91XX8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhgb1Q91XX8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhgb1Q91XX8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Pcdhgb1Q91XX8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhgb1Q91XX8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhgb1Q91XX8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhgb1Q91XX8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhgb1Q91XX8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pcdhgb1Q91XX8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgb1Q91XX8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms