Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
StrcQ8VIM6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
StrcQ8VIM6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
StrcQ8VIM6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
StrcQ8VIM6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
StrcQ8VIM6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
StrcQ8VIM6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
StrcQ8VIM6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
StrcQ8VIM6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
StrcQ8VIM6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
StrcQ8VIM6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC23.39■■□□□ 1.33
StrcQ8VIM6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
StrcQ8VIM6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
StrcQ8VIM6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
StrcQ8VIM6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
StrcQ8VIM6 Gm26971-201ENSMUST00000182423 1072 ntBASIC23.38■■□□□ 1.33
StrcQ8VIM6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC23.38■■□□□ 1.33
StrcQ8VIM6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
StrcQ8VIM6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
StrcQ8VIM6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.38■■□□□ 1.33
StrcQ8VIM6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
StrcQ8VIM6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
StrcQ8VIM6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC23.38■■□□□ 1.33
StrcQ8VIM6 Gm20472-201ENSMUST00000174403 1240 ntBASIC23.38■■□□□ 1.33
StrcQ8VIM6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
StrcQ8VIM6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
StrcQ8VIM6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
StrcQ8VIM6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
StrcQ8VIM6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
StrcQ8VIM6 Gm44549-201ENSMUST00000208351 577 ntBASIC23.37■■□□□ 1.33
StrcQ8VIM6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC23.37■■□□□ 1.33
StrcQ8VIM6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
StrcQ8VIM6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
StrcQ8VIM6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
StrcQ8VIM6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
StrcQ8VIM6 Nrn1-203ENSMUST00000223611 1443 ntBASIC23.37■■□□□ 1.33
StrcQ8VIM6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC23.36■■□□□ 1.33
StrcQ8VIM6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC23.36■■□□□ 1.33
StrcQ8VIM6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC23.36■■□□□ 1.33
StrcQ8VIM6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
StrcQ8VIM6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
StrcQ8VIM6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
StrcQ8VIM6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
StrcQ8VIM6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
StrcQ8VIM6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
StrcQ8VIM6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
StrcQ8VIM6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC23.35■■□□□ 1.33
StrcQ8VIM6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
StrcQ8VIM6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
StrcQ8VIM6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
StrcQ8VIM6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC23.35■■□□□ 1.33
StrcQ8VIM6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC23.35■■□□□ 1.33
StrcQ8VIM6 AC121577.1-201ENSMUST00000227302 707 ntBASIC23.35■■□□□ 1.33
StrcQ8VIM6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
StrcQ8VIM6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.35■■□□□ 1.33
StrcQ8VIM6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
StrcQ8VIM6 Gm10167-201ENSMUST00000150411 1479 ntBASIC23.35■■□□□ 1.33
StrcQ8VIM6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC23.35■■□□□ 1.33
StrcQ8VIM6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
StrcQ8VIM6 Gm18666-201ENSMUST00000190039 958 ntBASIC23.34■■□□□ 1.33
StrcQ8VIM6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
StrcQ8VIM6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
StrcQ8VIM6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
StrcQ8VIM6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.34■■□□□ 1.33
StrcQ8VIM6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
StrcQ8VIM6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
StrcQ8VIM6 Gm43799-201ENSMUST00000201845 579 ntBASIC23.33■■□□□ 1.33
StrcQ8VIM6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
StrcQ8VIM6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
StrcQ8VIM6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
StrcQ8VIM6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
StrcQ8VIM6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
StrcQ8VIM6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC23.32■■□□□ 1.32
StrcQ8VIM6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC23.32■■□□□ 1.32
StrcQ8VIM6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
StrcQ8VIM6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
StrcQ8VIM6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC23.31■■□□□ 1.32
StrcQ8VIM6 Gm43672-201ENSMUST00000199072 1731 ntBASIC23.31■■□□□ 1.32
StrcQ8VIM6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
StrcQ8VIM6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
StrcQ8VIM6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
StrcQ8VIM6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC23.31■■□□□ 1.32
StrcQ8VIM6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC23.31■■□□□ 1.32
StrcQ8VIM6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
StrcQ8VIM6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
StrcQ8VIM6 Gm13158-201ENSMUST00000122007 736 ntBASIC23.31■■□□□ 1.32
StrcQ8VIM6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
StrcQ8VIM6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
StrcQ8VIM6 Gm9987-201ENSMUST00000069768 567 ntBASIC23.31■■□□□ 1.32
StrcQ8VIM6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
StrcQ8VIM6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
StrcQ8VIM6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
StrcQ8VIM6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
StrcQ8VIM6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
StrcQ8VIM6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
StrcQ8VIM6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
StrcQ8VIM6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.3■■□□□ 1.32
StrcQ8VIM6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC23.3■■□□□ 1.32
StrcQ8VIM6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC23.3■■□□□ 1.32
StrcQ8VIM6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms