Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TraipQ8VIG6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TraipQ8VIG6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TraipQ8VIG6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TraipQ8VIG6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TraipQ8VIG6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TraipQ8VIG6 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.47■□□□□ 0.87
TraipQ8VIG6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TraipQ8VIG6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TraipQ8VIG6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TraipQ8VIG6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TraipQ8VIG6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TraipQ8VIG6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TraipQ8VIG6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TraipQ8VIG6 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.46■□□□□ 0.87
TraipQ8VIG6 Nespas-201ENSMUST00000143738 1083 ntBASIC20.46■□□□□ 0.87
TraipQ8VIG6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TraipQ8VIG6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
TraipQ8VIG6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TraipQ8VIG6 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.46■□□□□ 0.87
TraipQ8VIG6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TraipQ8VIG6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TraipQ8VIG6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TraipQ8VIG6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TraipQ8VIG6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TraipQ8VIG6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TraipQ8VIG6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TraipQ8VIG6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TraipQ8VIG6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TraipQ8VIG6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.45■□□□□ 0.86
TraipQ8VIG6 Gm6211-202ENSMUST00000167849 925 ntBASIC20.45■□□□□ 0.86
TraipQ8VIG6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TraipQ8VIG6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TraipQ8VIG6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TraipQ8VIG6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TraipQ8VIG6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TraipQ8VIG6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TraipQ8VIG6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.44■□□□□ 0.86
TraipQ8VIG6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TraipQ8VIG6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TraipQ8VIG6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TraipQ8VIG6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TraipQ8VIG6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TraipQ8VIG6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TraipQ8VIG6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TraipQ8VIG6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TraipQ8VIG6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TraipQ8VIG6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TraipQ8VIG6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TraipQ8VIG6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TraipQ8VIG6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.44■□□□□ 0.86
TraipQ8VIG6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TraipQ8VIG6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.43■□□□□ 0.86
TraipQ8VIG6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TraipQ8VIG6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.43■□□□□ 0.86
TraipQ8VIG6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TraipQ8VIG6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.43■□□□□ 0.86
TraipQ8VIG6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TraipQ8VIG6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TraipQ8VIG6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TraipQ8VIG6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.43■□□□□ 0.86
TraipQ8VIG6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.43■□□□□ 0.86
TraipQ8VIG6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TraipQ8VIG6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TraipQ8VIG6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TraipQ8VIG6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TraipQ8VIG6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TraipQ8VIG6 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.43■□□□□ 0.86
TraipQ8VIG6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TraipQ8VIG6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TraipQ8VIG6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TraipQ8VIG6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TraipQ8VIG6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
TraipQ8VIG6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TraipQ8VIG6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.42■□□□□ 0.86
TraipQ8VIG6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TraipQ8VIG6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TraipQ8VIG6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TraipQ8VIG6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TraipQ8VIG6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TraipQ8VIG6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TraipQ8VIG6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TraipQ8VIG6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.41■□□□□ 0.86
TraipQ8VIG6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TraipQ8VIG6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TraipQ8VIG6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TraipQ8VIG6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TraipQ8VIG6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TraipQ8VIG6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TraipQ8VIG6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TraipQ8VIG6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TraipQ8VIG6 Gm27011-201ENSMUST00000182352 972 ntBASIC20.4■□□□□ 0.86
TraipQ8VIG6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TraipQ8VIG6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TraipQ8VIG6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TraipQ8VIG6 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.39■□□□□ 0.86
TraipQ8VIG6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
TraipQ8VIG6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TraipQ8VIG6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TraipQ8VIG6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms