Protein–RNA interactions for Protein: Q8VH31

Rfpl4a, Ret finger protein-like 4A, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4aQ8VH31 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfpl4aQ8VH31 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfpl4aQ8VH31 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rfpl4aQ8VH31 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.16■□□□□ 0.5
Rfpl4aQ8VH31 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.16■□□□□ 0.5
Rfpl4aQ8VH31 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfpl4aQ8VH31 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.16■□□□□ 0.5
Rfpl4aQ8VH31 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfpl4aQ8VH31 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfpl4aQ8VH31 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Rfpl4aQ8VH31 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.15■□□□□ 0.5
Rfpl4aQ8VH31 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfpl4aQ8VH31 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfpl4aQ8VH31 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rfpl4aQ8VH31 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rfpl4aQ8VH31 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfpl4aQ8VH31 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfpl4aQ8VH31 Gm8520-201ENSMUST00000186517 868 ntBASIC18.15■□□□□ 0.5
Rfpl4aQ8VH31 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfpl4aQ8VH31 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Rfpl4aQ8VH31 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfpl4aQ8VH31 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Rfpl4aQ8VH31 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rfpl4aQ8VH31 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rfpl4aQ8VH31 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rfpl4aQ8VH31 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rfpl4aQ8VH31 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rfpl4aQ8VH31 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfpl4aQ8VH31 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfpl4aQ8VH31 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
Rfpl4aQ8VH31 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Rfpl4aQ8VH31 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Rfpl4aQ8VH31 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfpl4aQ8VH31 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rfpl4aQ8VH31 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.14■□□□□ 0.49
Rfpl4aQ8VH31 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rfpl4aQ8VH31 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfpl4aQ8VH31 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.13■□□□□ 0.49
Rfpl4aQ8VH31 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.13■□□□□ 0.49
Rfpl4aQ8VH31 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfpl4aQ8VH31 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfpl4aQ8VH31 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfpl4aQ8VH31 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 Gm26524-201ENSMUST00000192339 390 ntBASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Rfpl4aQ8VH31 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfpl4aQ8VH31 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfpl4aQ8VH31 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rfpl4aQ8VH31 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.11■□□□□ 0.49
Rfpl4aQ8VH31 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Rfpl4aQ8VH31 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfpl4aQ8VH31 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfpl4aQ8VH31 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rfpl4aQ8VH31 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.11■□□□□ 0.49
Rfpl4aQ8VH31 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.11■□□□□ 0.49
Rfpl4aQ8VH31 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfpl4aQ8VH31 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfpl4aQ8VH31 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfpl4aQ8VH31 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfpl4aQ8VH31 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rfpl4aQ8VH31 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.1■□□□□ 0.49
Rfpl4aQ8VH31 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.1■□□□□ 0.49
Rfpl4aQ8VH31 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfpl4aQ8VH31 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rfpl4aQ8VH31 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Rfpl4aQ8VH31 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfpl4aQ8VH31 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rfpl4aQ8VH31 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfpl4aQ8VH31 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfpl4aQ8VH31 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfpl4aQ8VH31 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
Rfpl4aQ8VH31 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.09■□□□□ 0.49
Rfpl4aQ8VH31 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.09■□□□□ 0.49
Rfpl4aQ8VH31 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfpl4aQ8VH31 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfpl4aQ8VH31 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfpl4aQ8VH31 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfpl4aQ8VH31 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.08■□□□□ 0.49
Rfpl4aQ8VH31 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfpl4aQ8VH31 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rfpl4aQ8VH31 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.08■□□□□ 0.48
Rfpl4aQ8VH31 Gm37856-201ENSMUST00000191634 999 ntBASIC18.08■□□□□ 0.48
Rfpl4aQ8VH31 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rfpl4aQ8VH31 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfpl4aQ8VH31 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.08■□□□□ 0.48
Rfpl4aQ8VH31 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms