Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ddx39aQ8VDW0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ddx39aQ8VDW0 Nespas-201ENSMUST00000143738 1083 ntBASIC21.37■■□□□ 1.01
Ddx39aQ8VDW0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.37■■□□□ 1.01
Ddx39aQ8VDW0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx39aQ8VDW0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx39aQ8VDW0 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.37■■□□□ 1.01
Ddx39aQ8VDW0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx39aQ8VDW0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx39aQ8VDW0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ddx39aQ8VDW0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx39aQ8VDW0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.36■■□□□ 1.01
Ddx39aQ8VDW0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.36■■□□□ 1.01
Ddx39aQ8VDW0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx39aQ8VDW0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx39aQ8VDW0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx39aQ8VDW0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx39aQ8VDW0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx39aQ8VDW0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx39aQ8VDW0 Gm7860-201ENSMUST00000121190 879 ntBASIC21.35■■□□□ 1.01
Ddx39aQ8VDW0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.35■■□□□ 1.01
Ddx39aQ8VDW0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx39aQ8VDW0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.35■■□□□ 1.01
Ddx39aQ8VDW0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx39aQ8VDW0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx39aQ8VDW0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx39aQ8VDW0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx39aQ8VDW0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx39aQ8VDW0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx39aQ8VDW0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.34■■□□□ 1.01
Ddx39aQ8VDW0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx39aQ8VDW0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx39aQ8VDW0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx39aQ8VDW0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx39aQ8VDW0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx39aQ8VDW0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx39aQ8VDW0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx39aQ8VDW0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.33■■□□□ 1.01
Ddx39aQ8VDW0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.33■■□□□ 1.01
Ddx39aQ8VDW0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx39aQ8VDW0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.33■■□□□ 1.01
Ddx39aQ8VDW0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx39aQ8VDW0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx39aQ8VDW0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ddx39aQ8VDW0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ddx39aQ8VDW0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ddx39aQ8VDW0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx39aQ8VDW0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ddx39aQ8VDW0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx39aQ8VDW0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx39aQ8VDW0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx39aQ8VDW0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Ddx39aQ8VDW0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx39aQ8VDW0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx39aQ8VDW0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx39aQ8VDW0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ddx39aQ8VDW0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx39aQ8VDW0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ddx39aQ8VDW0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.31■■□□□ 1
Ddx39aQ8VDW0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.31■■□□□ 1
Ddx39aQ8VDW0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.31■■□□□ 1
Ddx39aQ8VDW0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ddx39aQ8VDW0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx39aQ8VDW0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx39aQ8VDW0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx39aQ8VDW0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx39aQ8VDW0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx39aQ8VDW0 Gm13534-201ENSMUST00000121169 513 ntBASIC21.3■■□□□ 1
Ddx39aQ8VDW0 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.3■■□□□ 1
Ddx39aQ8VDW0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ddx39aQ8VDW0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx39aQ8VDW0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx39aQ8VDW0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx39aQ8VDW0 Gm6365-201ENSMUST00000054711 744 ntBASIC21.3■■□□□ 1
Ddx39aQ8VDW0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Ddx39aQ8VDW0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ddx39aQ8VDW0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx39aQ8VDW0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ddx39aQ8VDW0 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.29■■□□□ 1
Ddx39aQ8VDW0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.29■■□□□ 1
Ddx39aQ8VDW0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx39aQ8VDW0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.29■■□□□ 1
Ddx39aQ8VDW0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx39aQ8VDW0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx39aQ8VDW0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx39aQ8VDW0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ddx39aQ8VDW0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
Ddx39aQ8VDW0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ddx39aQ8VDW0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx39aQ8VDW0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx39aQ8VDW0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.28■■□□□ 1
Ddx39aQ8VDW0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx39aQ8VDW0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx39aQ8VDW0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ddx39aQ8VDW0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx39aQ8VDW0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx39aQ8VDW0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ddx39aQ8VDW0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ddx39aQ8VDW0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx39aQ8VDW0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms