Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20aQ8VDB9 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.94■□□□□ 0.62
Slc6a20aQ8VDB9 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.94■□□□□ 0.62
Slc6a20aQ8VDB9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20aQ8VDB9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20aQ8VDB9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20aQ8VDB9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Slc6a20aQ8VDB9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.94■□□□□ 0.62
Slc6a20aQ8VDB9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20aQ8VDB9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20aQ8VDB9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Slc6a20aQ8VDB9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Slc6a20aQ8VDB9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a20aQ8VDB9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a20aQ8VDB9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a20aQ8VDB9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a20aQ8VDB9 Gm8493-201ENSMUST00000196881 489 ntBASIC18.93■□□□□ 0.62
Slc6a20aQ8VDB9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a20aQ8VDB9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.93■□□□□ 0.62
Slc6a20aQ8VDB9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a20aQ8VDB9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a20aQ8VDB9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a20aQ8VDB9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a20aQ8VDB9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a20aQ8VDB9 Gm43173-201ENSMUST00000202246 593 ntBASIC18.92■□□□□ 0.62
Slc6a20aQ8VDB9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a20aQ8VDB9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Slc6a20aQ8VDB9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a20aQ8VDB9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Smad6-203ENSMUST00000179458 273 ntBASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20aQ8VDB9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a20aQ8VDB9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.9■□□□□ 0.62
Slc6a20aQ8VDB9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a20aQ8VDB9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Slc6a20aQ8VDB9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a20aQ8VDB9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Slc6a20aQ8VDB9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Slc6a20aQ8VDB9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a20aQ8VDB9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a20aQ8VDB9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a20aQ8VDB9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a20aQ8VDB9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a20aQ8VDB9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
Slc6a20aQ8VDB9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20aQ8VDB9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20aQ8VDB9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20aQ8VDB9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.89■□□□□ 0.61
Slc6a20aQ8VDB9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Slc6a20aQ8VDB9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20aQ8VDB9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.89■□□□□ 0.61
Slc6a20aQ8VDB9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20aQ8VDB9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20aQ8VDB9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20aQ8VDB9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20aQ8VDB9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Slc6a20aQ8VDB9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20aQ8VDB9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 Gm45417-201ENSMUST00000209533 758 ntBASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 Golph3-205ENSMUST00000228671 2842 ntBASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.88■□□□□ 0.61
Slc6a20aQ8VDB9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.87■□□□□ 0.61
Slc6a20aQ8VDB9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20aQ8VDB9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20aQ8VDB9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20aQ8VDB9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20aQ8VDB9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20aQ8VDB9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.87■□□□□ 0.61
Slc6a20aQ8VDB9 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.87■□□□□ 0.61
Slc6a20aQ8VDB9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20aQ8VDB9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20aQ8VDB9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20aQ8VDB9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20aQ8VDB9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms