Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup58Q8R332 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup58Q8R332 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nup58Q8R332 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup58Q8R332 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nup58Q8R332 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.5■□□□□ 0.87
Nup58Q8R332 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Nup58Q8R332 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Nup58Q8R332 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup58Q8R332 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup58Q8R332 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Nup58Q8R332 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup58Q8R332 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup58Q8R332 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup58Q8R332 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup58Q8R332 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup58Q8R332 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup58Q8R332 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nup58Q8R332 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.48■□□□□ 0.87
Nup58Q8R332 Serp2-204ENSMUST00000228055 705 ntBASIC20.48■□□□□ 0.87
Nup58Q8R332 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nup58Q8R332 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Nup58Q8R332 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.48■□□□□ 0.87
Nup58Q8R332 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup58Q8R332 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup58Q8R332 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nup58Q8R332 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.47■□□□□ 0.87
Nup58Q8R332 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nup58Q8R332 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nup58Q8R332 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nup58Q8R332 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nup58Q8R332 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nup58Q8R332 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nup58Q8R332 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nup58Q8R332 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.47■□□□□ 0.87
Nup58Q8R332 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Nup58Q8R332 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Nup58Q8R332 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nup58Q8R332 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nup58Q8R332 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nup58Q8R332 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nup58Q8R332 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nup58Q8R332 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
Nup58Q8R332 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Nup58Q8R332 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.46■□□□□ 0.87
Nup58Q8R332 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Nup58Q8R332 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nup58Q8R332 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nup58Q8R332 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nup58Q8R332 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nup58Q8R332 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Nup58Q8R332 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nup58Q8R332 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nup58Q8R332 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.45■□□□□ 0.86
Nup58Q8R332 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.45■□□□□ 0.86
Nup58Q8R332 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nup58Q8R332 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nup58Q8R332 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nup58Q8R332 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup58Q8R332 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup58Q8R332 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup58Q8R332 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup58Q8R332 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup58Q8R332 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Nup58Q8R332 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup58Q8R332 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup58Q8R332 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nup58Q8R332 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.44■□□□□ 0.86
Nup58Q8R332 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup58Q8R332 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup58Q8R332 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup58Q8R332 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup58Q8R332 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.44■□□□□ 0.86
Nup58Q8R332 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Nup58Q8R332 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup58Q8R332 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup58Q8R332 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.43■□□□□ 0.86
Nup58Q8R332 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup58Q8R332 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup58Q8R332 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nup58Q8R332 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup58Q8R332 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup58Q8R332 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup58Q8R332 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup58Q8R332 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.42■□□□□ 0.86
Nup58Q8R332 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Nup58Q8R332 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup58Q8R332 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup58Q8R332 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup58Q8R332 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup58Q8R332 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Nup58Q8R332 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup58Q8R332 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup58Q8R332 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup58Q8R332 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup58Q8R332 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup58Q8R332 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nup58Q8R332 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nup58Q8R332 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.41■□□□□ 0.86
Nup58Q8R332 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms