Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afjQ8R1M2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afjQ8R1M2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.79■□□□□ 0.44
H2afjQ8R1M2 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.79■□□□□ 0.44
H2afjQ8R1M2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.78■□□□□ 0.44
H2afjQ8R1M2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
H2afjQ8R1M2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afjQ8R1M2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afjQ8R1M2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afjQ8R1M2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.78■□□□□ 0.44
H2afjQ8R1M2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.78■□□□□ 0.44
H2afjQ8R1M2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.78■□□□□ 0.44
H2afjQ8R1M2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
H2afjQ8R1M2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
H2afjQ8R1M2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afjQ8R1M2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afjQ8R1M2 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.77■□□□□ 0.44
H2afjQ8R1M2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afjQ8R1M2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afjQ8R1M2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
H2afjQ8R1M2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
H2afjQ8R1M2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afjQ8R1M2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
H2afjQ8R1M2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.77■□□□□ 0.44
H2afjQ8R1M2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
H2afjQ8R1M2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.77■□□□□ 0.44
H2afjQ8R1M2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
H2afjQ8R1M2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
H2afjQ8R1M2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
H2afjQ8R1M2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
H2afjQ8R1M2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
H2afjQ8R1M2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
H2afjQ8R1M2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afjQ8R1M2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afjQ8R1M2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H2afjQ8R1M2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
H2afjQ8R1M2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afjQ8R1M2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afjQ8R1M2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afjQ8R1M2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.73■□□□□ 0.43
H2afjQ8R1M2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.73■□□□□ 0.43
H2afjQ8R1M2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afjQ8R1M2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms