Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdlim2Q8R1G6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdlim2Q8R1G6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdlim2Q8R1G6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
Pdlim2Q8R1G6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pdlim2Q8R1G6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pdlim2Q8R1G6 Gm45412-201ENSMUST00000210217 2275 ntBASIC22.21■■□□□ 1.15
Pdlim2Q8R1G6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pdlim2Q8R1G6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pdlim2Q8R1G6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC22.21■■□□□ 1.15
Pdlim2Q8R1G6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pdlim2Q8R1G6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pdlim2Q8R1G6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pdlim2Q8R1G6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Pdlim2Q8R1G6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Pdlim2Q8R1G6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pdlim2Q8R1G6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pdlim2Q8R1G6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pdlim2Q8R1G6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pdlim2Q8R1G6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pdlim2Q8R1G6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Pdlim2Q8R1G6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pdlim2Q8R1G6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pdlim2Q8R1G6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pdlim2Q8R1G6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pdlim2Q8R1G6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pdlim2Q8R1G6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pdlim2Q8R1G6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pdlim2Q8R1G6 Mir6236-201ENSMUST00000184437 123 ntBASIC22.19■■□□□ 1.14
Pdlim2Q8R1G6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.19■■□□□ 1.14
Pdlim2Q8R1G6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Pdlim2Q8R1G6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pdlim2Q8R1G6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pdlim2Q8R1G6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pdlim2Q8R1G6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pdlim2Q8R1G6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pdlim2Q8R1G6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Pdlim2Q8R1G6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pdlim2Q8R1G6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pdlim2Q8R1G6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pdlim2Q8R1G6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pdlim2Q8R1G6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pdlim2Q8R1G6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pdlim2Q8R1G6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pdlim2Q8R1G6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pdlim2Q8R1G6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pdlim2Q8R1G6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pdlim2Q8R1G6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pdlim2Q8R1G6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Pdlim2Q8R1G6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pdlim2Q8R1G6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Pdlim2Q8R1G6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Pdlim2Q8R1G6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pdlim2Q8R1G6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pdlim2Q8R1G6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
Pdlim2Q8R1G6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pdlim2Q8R1G6 AA386476-201ENSMUST00000098781 1665 ntBASIC22.16■■□□□ 1.14
Pdlim2Q8R1G6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pdlim2Q8R1G6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pdlim2Q8R1G6 Fcho2-208ENSMUST00000224992 2964 ntBASIC22.16■■□□□ 1.14
Pdlim2Q8R1G6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC22.16■■□□□ 1.14
Pdlim2Q8R1G6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pdlim2Q8R1G6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Gm32699-201ENSMUST00000221728 1988 ntBASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdlim2Q8R1G6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pdlim2Q8R1G6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pdlim2Q8R1G6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pdlim2Q8R1G6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pdlim2Q8R1G6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pdlim2Q8R1G6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pdlim2Q8R1G6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pdlim2Q8R1G6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
Pdlim2Q8R1G6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pdlim2Q8R1G6 Gm11687-201ENSMUST00000118911 886 ntBASIC22.13■■□□□ 1.13
Pdlim2Q8R1G6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pdlim2Q8R1G6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.13■■□□□ 1.13
Pdlim2Q8R1G6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pdlim2Q8R1G6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pdlim2Q8R1G6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pdlim2Q8R1G6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Pdlim2Q8R1G6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Pdlim2Q8R1G6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Pdlim2Q8R1G6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.12■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms