Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clrn1Q8K445 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clrn1Q8K445 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clrn1Q8K445 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clrn1Q8K445 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Clrn1Q8K445 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clrn1Q8K445 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clrn1Q8K445 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clrn1Q8K445 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clrn1Q8K445 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clrn1Q8K445 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn1Q8K445 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.09■□□□□ 0.49
Clrn1Q8K445 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clrn1Q8K445 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clrn1Q8K445 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clrn1Q8K445 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clrn1Q8K445 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clrn1Q8K445 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Clrn1Q8K445 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clrn1Q8K445 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.08■□□□□ 0.48
Clrn1Q8K445 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clrn1Q8K445 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Clrn1Q8K445 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clrn1Q8K445 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clrn1Q8K445 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clrn1Q8K445 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clrn1Q8K445 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clrn1Q8K445 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clrn1Q8K445 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clrn1Q8K445 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clrn1Q8K445 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clrn1Q8K445 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Clrn1Q8K445 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clrn1Q8K445 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clrn1Q8K445 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clrn1Q8K445 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clrn1Q8K445 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clrn1Q8K445 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn1Q8K445 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn1Q8K445 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn1Q8K445 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn1Q8K445 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn1Q8K445 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.06■□□□□ 0.48
Clrn1Q8K445 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn1Q8K445 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Clrn1Q8K445 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn1Q8K445 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.06■□□□□ 0.48
Clrn1Q8K445 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn1Q8K445 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn1Q8K445 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.06■□□□□ 0.48
Clrn1Q8K445 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn1Q8K445 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn1Q8K445 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn1Q8K445 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clrn1Q8K445 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.05■□□□□ 0.48
Clrn1Q8K445 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.05■□□□□ 0.48
Clrn1Q8K445 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clrn1Q8K445 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Clrn1Q8K445 Gm43060-201ENSMUST00000200621 289 ntBASIC18.05■□□□□ 0.48
Clrn1Q8K445 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clrn1Q8K445 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clrn1Q8K445 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clrn1Q8K445 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.05■□□□□ 0.48
Clrn1Q8K445 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clrn1Q8K445 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clrn1Q8K445 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Clrn1Q8K445 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn1Q8K445 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn1Q8K445 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn1Q8K445 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn1Q8K445 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn1Q8K445 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Clrn1Q8K445 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.04■□□□□ 0.48
Clrn1Q8K445 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Clrn1Q8K445 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Clrn1Q8K445 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.04■□□□□ 0.48
Clrn1Q8K445 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.04■□□□□ 0.48
Clrn1Q8K445 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Clrn1Q8K445 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn1Q8K445 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn1Q8K445 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn1Q8K445 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn1Q8K445 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn1Q8K445 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms