Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Abca8bQ8K440 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Abca8bQ8K440 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
Abca8bQ8K440 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC28.89■■■□□ 2.22
Abca8bQ8K440 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Abca8bQ8K440 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Abca8bQ8K440 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
Abca8bQ8K440 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Abca8bQ8K440 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Abca8bQ8K440 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC28.87■■■□□ 2.21
Abca8bQ8K440 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Abca8bQ8K440 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Abca8bQ8K440 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC28.87■■■□□ 2.21
Abca8bQ8K440 Nrn1-203ENSMUST00000223611 1443 ntBASIC28.87■■■□□ 2.21
Abca8bQ8K440 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Abca8bQ8K440 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC28.87■■■□□ 2.21
Abca8bQ8K440 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC28.87■■■□□ 2.21
Abca8bQ8K440 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Abca8bQ8K440 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Abca8bQ8K440 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC28.86■■■□□ 2.21
Abca8bQ8K440 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC28.86■■■□□ 2.21
Abca8bQ8K440 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Abca8bQ8K440 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Abca8bQ8K440 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Abca8bQ8K440 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Abca8bQ8K440 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Abca8bQ8K440 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Abca8bQ8K440 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
Abca8bQ8K440 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC28.85■■■□□ 2.21
Abca8bQ8K440 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC28.85■■■□□ 2.21
Abca8bQ8K440 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
Abca8bQ8K440 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC28.85■■■□□ 2.21
Abca8bQ8K440 AC163280.1-201ENSMUST00000228194 1100 ntBASIC28.85■■■□□ 2.21
Abca8bQ8K440 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Abca8bQ8K440 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Abca8bQ8K440 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Abca8bQ8K440 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
Abca8bQ8K440 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC28.84■■■□□ 2.21
Abca8bQ8K440 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Abca8bQ8K440 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC28.84■■■□□ 2.21
Abca8bQ8K440 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Abca8bQ8K440 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Abca8bQ8K440 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
Abca8bQ8K440 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC28.83■■■□□ 2.21
Abca8bQ8K440 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC28.83■■■□□ 2.21
Abca8bQ8K440 AC153881.2-201ENSMUST00000214877 204 ntBASIC28.83■■■□□ 2.21
Abca8bQ8K440 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Abca8bQ8K440 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Abca8bQ8K440 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Abca8bQ8K440 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Abca8bQ8K440 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Abca8bQ8K440 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Abca8bQ8K440 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Abca8bQ8K440 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Abca8bQ8K440 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
Abca8bQ8K440 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Abca8bQ8K440 Gm26971-201ENSMUST00000182423 1072 ntBASIC28.82■■■□□ 2.2
Abca8bQ8K440 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Abca8bQ8K440 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Abca8bQ8K440 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Abca8bQ8K440 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC28.81■■■□□ 2.2
Abca8bQ8K440 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Abca8bQ8K440 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC28.81■■■□□ 2.2
Abca8bQ8K440 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Abca8bQ8K440 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Abca8bQ8K440 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Abca8bQ8K440 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Abca8bQ8K440 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Abca8bQ8K440 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Abca8bQ8K440 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC28.8■■■□□ 2.2
Abca8bQ8K440 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC28.8■■■□□ 2.2
Abca8bQ8K440 AC121577.1-201ENSMUST00000227302 707 ntBASIC28.8■■■□□ 2.2
Abca8bQ8K440 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
Abca8bQ8K440 Gm43672-201ENSMUST00000199072 1731 ntBASIC28.8■■■□□ 2.2
Abca8bQ8K440 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Abca8bQ8K440 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Abca8bQ8K440 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Abca8bQ8K440 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC28.8■■■□□ 2.2
Abca8bQ8K440 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC28.79■■■□□ 2.2
Abca8bQ8K440 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Abca8bQ8K440 Gm10167-201ENSMUST00000150411 1479 ntBASIC28.79■■■□□ 2.2
Abca8bQ8K440 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Abca8bQ8K440 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC28.79■■■□□ 2.2
Abca8bQ8K440 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Abca8bQ8K440 CT010444.2-201ENSMUST00000217877 1629 ntBASIC28.79■■■□□ 2.2
Abca8bQ8K440 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Abca8bQ8K440 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC28.78■■■□□ 2.2
Abca8bQ8K440 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Abca8bQ8K440 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Abca8bQ8K440 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Abca8bQ8K440 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Abca8bQ8K440 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
Abca8bQ8K440 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Abca8bQ8K440 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Abca8bQ8K440 Gm15378-201ENSMUST00000121894 207 ntBASIC28.77■■■□□ 2.2
Abca8bQ8K440 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC28.77■■■□□ 2.2
Abca8bQ8K440 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Abca8bQ8K440 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Abca8bQ8K440 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Abca8bQ8K440 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms