Protein–RNA interactions for Protein: Q8K268

Abcf3, ATP-binding cassette sub-family F member 3, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf3Q8K268 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcf3Q8K268 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Abcf3Q8K268 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcf3Q8K268 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.25■□□□□ 0.67
Abcf3Q8K268 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.25■□□□□ 0.67
Abcf3Q8K268 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.25■□□□□ 0.67
Abcf3Q8K268 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcf3Q8K268 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.25■□□□□ 0.67
Abcf3Q8K268 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.25■□□□□ 0.67
Abcf3Q8K268 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.24■□□□□ 0.67
Abcf3Q8K268 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf3Q8K268 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf3Q8K268 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.24■□□□□ 0.67
Abcf3Q8K268 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Abcf3Q8K268 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf3Q8K268 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf3Q8K268 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf3Q8K268 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf3Q8K268 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf3Q8K268 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf3Q8K268 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf3Q8K268 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf3Q8K268 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf3Q8K268 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf3Q8K268 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf3Q8K268 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf3Q8K268 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf3Q8K268 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcf3Q8K268 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcf3Q8K268 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Abcf3Q8K268 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.22■□□□□ 0.67
Abcf3Q8K268 Gm15820-201ENSMUST00000201566 728 ntBASIC19.22■□□□□ 0.67
Abcf3Q8K268 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcf3Q8K268 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcf3Q8K268 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcf3Q8K268 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcf3Q8K268 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Abcf3Q8K268 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf3Q8K268 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.21■□□□□ 0.67
Abcf3Q8K268 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf3Q8K268 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Abcf3Q8K268 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf3Q8K268 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf3Q8K268 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.21■□□□□ 0.67
Abcf3Q8K268 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.21■□□□□ 0.67
Abcf3Q8K268 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf3Q8K268 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.21■□□□□ 0.67
Abcf3Q8K268 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Abcf3Q8K268 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf3Q8K268 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf3Q8K268 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf3Q8K268 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf3Q8K268 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf3Q8K268 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf3Q8K268 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf3Q8K268 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf3Q8K268 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf3Q8K268 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf3Q8K268 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf3Q8K268 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Abcf3Q8K268 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf3Q8K268 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf3Q8K268 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.2■□□□□ 0.66
Abcf3Q8K268 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcf3Q8K268 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Abcf3Q8K268 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.19■□□□□ 0.66
Abcf3Q8K268 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.19■□□□□ 0.66
Abcf3Q8K268 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.19■□□□□ 0.66
Abcf3Q8K268 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcf3Q8K268 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcf3Q8K268 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcf3Q8K268 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.19■□□□□ 0.66
Abcf3Q8K268 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcf3Q8K268 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcf3Q8K268 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Abcf3Q8K268 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.18■□□□□ 0.66
Abcf3Q8K268 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcf3Q8K268 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcf3Q8K268 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcf3Q8K268 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Abcf3Q8K268 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcf3Q8K268 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.18■□□□□ 0.66
Abcf3Q8K268 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcf3Q8K268 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf3Q8K268 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Abcf3Q8K268 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf3Q8K268 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf3Q8K268 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Abcf3Q8K268 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf3Q8K268 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf3Q8K268 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf3Q8K268 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf3Q8K268 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf3Q8K268 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Abcf3Q8K268 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcf3Q8K268 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Abcf3Q8K268 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcf3Q8K268 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Abcf3Q8K268 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcf3Q8K268 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms