Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnot3Q8K0V4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnot3Q8K0V4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnot3Q8K0V4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnot3Q8K0V4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnot3Q8K0V4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnot3Q8K0V4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cnot3Q8K0V4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnot3Q8K0V4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cnot3Q8K0V4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cnot3Q8K0V4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.02■□□□□ 0.48
Cnot3Q8K0V4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.02■□□□□ 0.48
Cnot3Q8K0V4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Cnot3Q8K0V4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cnot3Q8K0V4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cnot3Q8K0V4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cnot3Q8K0V4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cnot3Q8K0V4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cnot3Q8K0V4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.01■□□□□ 0.47
Cnot3Q8K0V4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cnot3Q8K0V4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cnot3Q8K0V4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cnot3Q8K0V4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cnot3Q8K0V4 AA386476-201ENSMUST00000098781 1665 ntBASIC18■□□□□ 0.47
Cnot3Q8K0V4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cnot3Q8K0V4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18■□□□□ 0.47
Cnot3Q8K0V4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18■□□□□ 0.47
Cnot3Q8K0V4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cnot3Q8K0V4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnot3Q8K0V4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Gm9870-201ENSMUST00000063874 645 ntBASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnot3Q8K0V4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Etf1-202ENSMUST00000180351 108 ntBASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cnot3Q8K0V4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms