Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm6Q8CIR4 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.37■□□□□ 0.69
Trpm6Q8CIR4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm6Q8CIR4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm6Q8CIR4 Gm20049-201ENSMUST00000219950 730 ntBASIC19.37■□□□□ 0.69
Trpm6Q8CIR4 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.37■□□□□ 0.69
Trpm6Q8CIR4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm6Q8CIR4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm6Q8CIR4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm6Q8CIR4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm6Q8CIR4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.36■□□□□ 0.69
Trpm6Q8CIR4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.36■□□□□ 0.69
Trpm6Q8CIR4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm6Q8CIR4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm6Q8CIR4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm6Q8CIR4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trpm6Q8CIR4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trpm6Q8CIR4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm6Q8CIR4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trpm6Q8CIR4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm6Q8CIR4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm6Q8CIR4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpm6Q8CIR4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpm6Q8CIR4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpm6Q8CIR4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trpm6Q8CIR4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpm6Q8CIR4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpm6Q8CIR4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpm6Q8CIR4 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.34■□□□□ 0.69
Trpm6Q8CIR4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trpm6Q8CIR4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpm6Q8CIR4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpm6Q8CIR4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.34■□□□□ 0.69
Trpm6Q8CIR4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trpm6Q8CIR4 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.33■□□□□ 0.69
Trpm6Q8CIR4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trpm6Q8CIR4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trpm6Q8CIR4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trpm6Q8CIR4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Trpm6Q8CIR4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trpm6Q8CIR4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trpm6Q8CIR4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.32■□□□□ 0.68
Trpm6Q8CIR4 Gm37856-201ENSMUST00000191634 999 ntBASIC19.32■□□□□ 0.68
Trpm6Q8CIR4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.32■□□□□ 0.68
Trpm6Q8CIR4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trpm6Q8CIR4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trpm6Q8CIR4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trpm6Q8CIR4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trpm6Q8CIR4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trpm6Q8CIR4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trpm6Q8CIR4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trpm6Q8CIR4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.32■□□□□ 0.68
Trpm6Q8CIR4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trpm6Q8CIR4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trpm6Q8CIR4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpm6Q8CIR4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trpm6Q8CIR4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Trpm6Q8CIR4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpm6Q8CIR4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpm6Q8CIR4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trpm6Q8CIR4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trpm6Q8CIR4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpm6Q8CIR4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.3■□□□□ 0.68
Trpm6Q8CIR4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trpm6Q8CIR4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Trpm6Q8CIR4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trpm6Q8CIR4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpm6Q8CIR4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpm6Q8CIR4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpm6Q8CIR4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpm6Q8CIR4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpm6Q8CIR4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trpm6Q8CIR4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Trpm6Q8CIR4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.3■□□□□ 0.68
Trpm6Q8CIR4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.3■□□□□ 0.68
Trpm6Q8CIR4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpm6Q8CIR4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm6Q8CIR4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm6Q8CIR4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm6Q8CIR4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.29■□□□□ 0.68
Trpm6Q8CIR4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm6Q8CIR4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trpm6Q8CIR4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm6Q8CIR4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms