Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1aQ8CIG0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.75■■□□□ 1.07
Depdc1aQ8CIG0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1aQ8CIG0 Nespas-201ENSMUST00000143738 1083 ntBASIC21.75■■□□□ 1.07
Depdc1aQ8CIG0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1aQ8CIG0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Depdc1aQ8CIG0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1aQ8CIG0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Depdc1aQ8CIG0 Gm10602-201ENSMUST00000098239 609 ntBASIC21.75■■□□□ 1.07
Depdc1aQ8CIG0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Depdc1aQ8CIG0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Depdc1aQ8CIG0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Depdc1aQ8CIG0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Depdc1aQ8CIG0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Depdc1aQ8CIG0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Depdc1aQ8CIG0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.74■■□□□ 1.07
Depdc1aQ8CIG0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Depdc1aQ8CIG0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Depdc1aQ8CIG0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Depdc1aQ8CIG0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Depdc1aQ8CIG0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Depdc1aQ8CIG0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Depdc1aQ8CIG0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Depdc1aQ8CIG0 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.73■■□□□ 1.07
Depdc1aQ8CIG0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Depdc1aQ8CIG0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.73■■□□□ 1.07
Depdc1aQ8CIG0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Depdc1aQ8CIG0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Depdc1aQ8CIG0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Depdc1aQ8CIG0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Depdc1aQ8CIG0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Depdc1aQ8CIG0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Depdc1aQ8CIG0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Depdc1aQ8CIG0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Depdc1aQ8CIG0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Depdc1aQ8CIG0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Depdc1aQ8CIG0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Depdc1aQ8CIG0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Depdc1aQ8CIG0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Depdc1aQ8CIG0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Depdc1aQ8CIG0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Depdc1aQ8CIG0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Depdc1aQ8CIG0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Depdc1aQ8CIG0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Depdc1aQ8CIG0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Depdc1aQ8CIG0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Depdc1aQ8CIG0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Depdc1aQ8CIG0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Depdc1aQ8CIG0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Depdc1aQ8CIG0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Depdc1aQ8CIG0 Mir5133-201ENSMUST00000174955 77 ntBASIC21.68■■□□□ 1.06
Depdc1aQ8CIG0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Depdc1aQ8CIG0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Depdc1aQ8CIG0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Depdc1aQ8CIG0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Depdc1aQ8CIG0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Depdc1aQ8CIG0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Depdc1aQ8CIG0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Depdc1aQ8CIG0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Depdc1aQ8CIG0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Depdc1aQ8CIG0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.67■■□□□ 1.06
Depdc1aQ8CIG0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Depdc1aQ8CIG0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Depdc1aQ8CIG0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Depdc1aQ8CIG0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Depdc1aQ8CIG0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Depdc1aQ8CIG0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Depdc1aQ8CIG0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms