Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.1■□□□□ 0.97
Sox30Q8CGW4 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.1■□□□□ 0.97
Sox30Q8CGW4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sox30Q8CGW4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox30Q8CGW4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox30Q8CGW4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox30Q8CGW4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox30Q8CGW4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox30Q8CGW4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox30Q8CGW4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox30Q8CGW4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox30Q8CGW4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox30Q8CGW4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Sox30Q8CGW4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox30Q8CGW4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox30Q8CGW4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sox30Q8CGW4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.08■□□□□ 0.97
Sox30Q8CGW4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.08■□□□□ 0.97
Sox30Q8CGW4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.08■□□□□ 0.97
Sox30Q8CGW4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sox30Q8CGW4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sox30Q8CGW4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Sox30Q8CGW4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.08■□□□□ 0.96
Sox30Q8CGW4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sox30Q8CGW4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Sox30Q8CGW4 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.08■□□□□ 0.96
Sox30Q8CGW4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox30Q8CGW4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox30Q8CGW4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox30Q8CGW4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox30Q8CGW4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sox30Q8CGW4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.07■□□□□ 0.96
Sox30Q8CGW4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sox30Q8CGW4 Golgb1-201ENSMUST00000023534 498 ntBASIC21.07■□□□□ 0.96
Sox30Q8CGW4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox30Q8CGW4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox30Q8CGW4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.07■□□□□ 0.96
Sox30Q8CGW4 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.07■□□□□ 0.96
Sox30Q8CGW4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Sox30Q8CGW4 Grk6-206ENSMUST00000224995 2971 ntBASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sox30Q8CGW4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sox30Q8CGW4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox30Q8CGW4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Sox30Q8CGW4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox30Q8CGW4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.05■□□□□ 0.96
Sox30Q8CGW4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Sox30Q8CGW4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Sox30Q8CGW4 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.05■□□□□ 0.96
Sox30Q8CGW4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox30Q8CGW4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox30Q8CGW4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox30Q8CGW4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sox30Q8CGW4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox30Q8CGW4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sox30Q8CGW4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox30Q8CGW4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox30Q8CGW4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sox30Q8CGW4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox30Q8CGW4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Sox30Q8CGW4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.04■□□□□ 0.96
Sox30Q8CGW4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox30Q8CGW4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.04■□□□□ 0.96
Sox30Q8CGW4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox30Q8CGW4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.04■□□□□ 0.96
Sox30Q8CGW4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox30Q8CGW4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Sox30Q8CGW4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox30Q8CGW4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox30Q8CGW4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Sox30Q8CGW4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.03■□□□□ 0.96
Sox30Q8CGW4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox30Q8CGW4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sox30Q8CGW4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.03■□□□□ 0.96
Sox30Q8CGW4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox30Q8CGW4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.02■□□□□ 0.96
Sox30Q8CGW4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Sox30Q8CGW4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox30Q8CGW4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.02■□□□□ 0.96
Sox30Q8CGW4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox30Q8CGW4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox30Q8CGW4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox30Q8CGW4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox30Q8CGW4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox30Q8CGW4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms