Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc4Q8CG47 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Smc4Q8CG47 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Smc4Q8CG47 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Smc4Q8CG47 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc4Q8CG47 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc4Q8CG47 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Smc4Q8CG47 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC23.7■■□□□ 1.38
Smc4Q8CG47 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc4Q8CG47 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc4Q8CG47 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc4Q8CG47 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc4Q8CG47 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc4Q8CG47 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Smc4Q8CG47 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc4Q8CG47 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.69■■□□□ 1.38
Smc4Q8CG47 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.69■■□□□ 1.38
Smc4Q8CG47 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Smc4Q8CG47 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.68■■□□□ 1.38
Smc4Q8CG47 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC23.68■■□□□ 1.38
Smc4Q8CG47 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc4Q8CG47 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc4Q8CG47 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc4Q8CG47 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc4Q8CG47 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Gm13534-201ENSMUST00000121169 513 ntBASIC23.67■■□□□ 1.38
Smc4Q8CG47 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc4Q8CG47 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
Smc4Q8CG47 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Smc4Q8CG47 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Smc4Q8CG47 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc4Q8CG47 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Smc4Q8CG47 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc4Q8CG47 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Smc4Q8CG47 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Smc4Q8CG47 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Smc4Q8CG47 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Smc4Q8CG47 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Smc4Q8CG47 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC23.64■■□□□ 1.37
Smc4Q8CG47 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc4Q8CG47 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc4Q8CG47 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc4Q8CG47 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc4Q8CG47 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC23.63■■□□□ 1.37
Smc4Q8CG47 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC23.63■■□□□ 1.37
Smc4Q8CG47 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Smc4Q8CG47 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Smc4Q8CG47 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Smc4Q8CG47 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Smc4Q8CG47 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC23.62■■□□□ 1.37
Smc4Q8CG47 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Smc4Q8CG47 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Smc4Q8CG47 Gm27032-201ENSMUST00000183124 1116 ntBASIC23.61■■□□□ 1.37
Smc4Q8CG47 Gm42555-201ENSMUST00000199304 1039 ntBASIC23.61■■□□□ 1.37
Smc4Q8CG47 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.61■■□□□ 1.37
Smc4Q8CG47 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Smc4Q8CG47 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Smc4Q8CG47 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Smc4Q8CG47 Gm10655-201ENSMUST00000098658 1397 ntBASIC23.61■■□□□ 1.37
Smc4Q8CG47 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Smc4Q8CG47 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.61■■□□□ 1.37
Smc4Q8CG47 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Smc4Q8CG47 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Smc4Q8CG47 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Smc4Q8CG47 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Smc4Q8CG47 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Smc4Q8CG47 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Smc4Q8CG47 Gm32699-201ENSMUST00000221728 1988 ntBASIC23.6■■□□□ 1.37
Smc4Q8CG47 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.59■■□□□ 1.37
Smc4Q8CG47 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC23.59■■□□□ 1.37
Smc4Q8CG47 Mir5133-201ENSMUST00000174955 77 ntBASIC23.59■■□□□ 1.37
Smc4Q8CG47 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Smc4Q8CG47 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Smc4Q8CG47 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Smc4Q8CG47 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms