Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc4Q8CG47 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Smc4Q8CG47 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Smc4Q8CG47 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Smc4Q8CG47 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc4Q8CG47 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc4Q8CG47 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Smc4Q8CG47 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC23.7■■□□□ 1.38
Smc4Q8CG47 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc4Q8CG47 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc4Q8CG47 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc4Q8CG47 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc4Q8CG47 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc4Q8CG47 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Smc4Q8CG47 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc4Q8CG47 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.69■■□□□ 1.38
Smc4Q8CG47 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.69■■□□□ 1.38
Smc4Q8CG47 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Smc4Q8CG47 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.68■■□□□ 1.38
Smc4Q8CG47 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC23.68■■□□□ 1.38
Smc4Q8CG47 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc4Q8CG47 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc4Q8CG47 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc4Q8CG47 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc4Q8CG47 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Gm13534-201ENSMUST00000121169 513 ntBASIC23.67■■□□□ 1.38
Smc4Q8CG47 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc4Q8CG47 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Smc4Q8CG47 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc4Q8CG47 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
Smc4Q8CG47 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Smc4Q8CG47 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Smc4Q8CG47 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc4Q8CG47 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Smc4Q8CG47 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc4Q8CG47 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Smc4Q8CG47 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Smc4Q8CG47 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Smc4Q8CG47 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Smc4Q8CG47 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Smc4Q8CG47 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC23.64■■□□□ 1.37
Smc4Q8CG47 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc4Q8CG47 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc4Q8CG47 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc4Q8CG47 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc4Q8CG47 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC23.63■■□□□ 1.37
Smc4Q8CG47 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC23.63■■□□□ 1.37
Smc4Q8CG47 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Smc4Q8CG47 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Smc4Q8CG47 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Smc4Q8CG47 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Smc4Q8CG47 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC23.62■■□□□ 1.37
Smc4Q8CG47 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Smc4Q8CG47 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Smc4Q8CG47 Gm27032-201ENSMUST00000183124 1116 ntBASIC23.61■■□□□ 1.37
Smc4Q8CG47 Gm42555-201ENSMUST00000199304 1039 ntBASIC23.61■■□□□ 1.37
Smc4Q8CG47 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.61■■□□□ 1.37
Smc4Q8CG47 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Smc4Q8CG47 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Smc4Q8CG47 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Smc4Q8CG47 Gm10655-201ENSMUST00000098658 1397 ntBASIC23.61■■□□□ 1.37
Smc4Q8CG47 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Smc4Q8CG47 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.61■■□□□ 1.37
Smc4Q8CG47 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Smc4Q8CG47 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Smc4Q8CG47 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Smc4Q8CG47 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Smc4Q8CG47 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Smc4Q8CG47 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Smc4Q8CG47 Gm32699-201ENSMUST00000221728 1988 ntBASIC23.6■■□□□ 1.37
Smc4Q8CG47 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.59■■□□□ 1.37
Smc4Q8CG47 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC23.59■■□□□ 1.37
Smc4Q8CG47 Mir5133-201ENSMUST00000174955 77 ntBASIC23.59■■□□□ 1.37
Smc4Q8CG47 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Smc4Q8CG47 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Smc4Q8CG47 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Smc4Q8CG47 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms