Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc17Q8CE13 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc17Q8CE13 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc17Q8CE13 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.84■□□□□ 0.77
Ccdc17Q8CE13 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc17Q8CE13 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc17Q8CE13 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc17Q8CE13 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc17Q8CE13 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ccdc17Q8CE13 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc17Q8CE13 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ccdc17Q8CE13 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ccdc17Q8CE13 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc17Q8CE13 Gm6420-201ENSMUST00000193885 723 ntBASIC19.83■□□□□ 0.77
Ccdc17Q8CE13 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.83■□□□□ 0.77
Ccdc17Q8CE13 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc17Q8CE13 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.83■□□□□ 0.77
Ccdc17Q8CE13 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Ccdc17Q8CE13 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc17Q8CE13 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc17Q8CE13 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc17Q8CE13 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc17Q8CE13 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc17Q8CE13 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc17Q8CE13 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Gm13148-201ENSMUST00000118892 745 ntBASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc17Q8CE13 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
Ccdc17Q8CE13 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.81■□□□□ 0.76
Ccdc17Q8CE13 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc17Q8CE13 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Ccdc17Q8CE13 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc17Q8CE13 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc17Q8CE13 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.81■□□□□ 0.76
Ccdc17Q8CE13 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Ccdc17Q8CE13 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc17Q8CE13 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc17Q8CE13 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc17Q8CE13 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc17Q8CE13 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc17Q8CE13 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc17Q8CE13 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc17Q8CE13 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.8■□□□□ 0.76
Ccdc17Q8CE13 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc17Q8CE13 Gm8520-201ENSMUST00000186517 868 ntBASIC19.8■□□□□ 0.76
Ccdc17Q8CE13 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc17Q8CE13 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc17Q8CE13 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc17Q8CE13 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc17Q8CE13 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ccdc17Q8CE13 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Ccdc17Q8CE13 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.79■□□□□ 0.76
Ccdc17Q8CE13 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc17Q8CE13 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc17Q8CE13 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc17Q8CE13 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc17Q8CE13 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ccdc17Q8CE13 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc17Q8CE13 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc17Q8CE13 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc17Q8CE13 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc17Q8CE13 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc17Q8CE13 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc17Q8CE13 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc17Q8CE13 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc17Q8CE13 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc17Q8CE13 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ccdc17Q8CE13 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.78■□□□□ 0.76
Ccdc17Q8CE13 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc17Q8CE13 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc17Q8CE13 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc17Q8CE13 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc17Q8CE13 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc17Q8CE13 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.77■□□□□ 0.76
Ccdc17Q8CE13 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc17Q8CE13 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc17Q8CE13 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.77■□□□□ 0.76
Ccdc17Q8CE13 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.77■□□□□ 0.76
Ccdc17Q8CE13 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc17Q8CE13 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc17Q8CE13 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Ccdc17Q8CE13 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc17Q8CE13 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc17Q8CE13 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc17Q8CE13 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc17Q8CE13 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc17Q8CE13 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 133.6 ms