Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim52Q8CDV4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim52Q8CDV4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim52Q8CDV4 Gm26524-201ENSMUST00000192339 390 ntBASIC23.94■■□□□ 1.42
Trim52Q8CDV4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim52Q8CDV4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim52Q8CDV4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim52Q8CDV4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim52Q8CDV4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim52Q8CDV4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim52Q8CDV4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim52Q8CDV4 AC122769.4-201ENSMUST00000228166 901 ntBASIC23.93■■□□□ 1.42
Trim52Q8CDV4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Trim52Q8CDV4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trim52Q8CDV4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim52Q8CDV4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Trim52Q8CDV4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trim52Q8CDV4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Trim52Q8CDV4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Trim52Q8CDV4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Trim52Q8CDV4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Trim52Q8CDV4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Trim52Q8CDV4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
Trim52Q8CDV4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim52Q8CDV4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim52Q8CDV4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim52Q8CDV4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim52Q8CDV4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
Trim52Q8CDV4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Trim52Q8CDV4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Trim52Q8CDV4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Trim52Q8CDV4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Trim52Q8CDV4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.91■■□□□ 1.42
Trim52Q8CDV4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.9■■□□□ 1.42
Trim52Q8CDV4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC23.9■■□□□ 1.42
Trim52Q8CDV4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim52Q8CDV4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC23.9■■□□□ 1.42
Trim52Q8CDV4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Trim52Q8CDV4 Gm20049-201ENSMUST00000219950 730 ntBASIC23.9■■□□□ 1.42
Trim52Q8CDV4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Trim52Q8CDV4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim52Q8CDV4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Trim52Q8CDV4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Trim52Q8CDV4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Trim52Q8CDV4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Trim52Q8CDV4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Trim52Q8CDV4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC23.89■■□□□ 1.41
Trim52Q8CDV4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC23.89■■□□□ 1.41
Trim52Q8CDV4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trim52Q8CDV4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trim52Q8CDV4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Trim52Q8CDV4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trim52Q8CDV4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim52Q8CDV4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim52Q8CDV4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim52Q8CDV4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim52Q8CDV4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.88■■□□□ 1.41
Trim52Q8CDV4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim52Q8CDV4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC23.88■■□□□ 1.41
Trim52Q8CDV4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim52Q8CDV4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim52Q8CDV4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Trim52Q8CDV4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim52Q8CDV4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim52Q8CDV4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim52Q8CDV4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim52Q8CDV4 Gm20760-201ENSMUST00000179197 648 ntBASIC23.87■■□□□ 1.41
Trim52Q8CDV4 Gm26971-201ENSMUST00000182423 1072 ntBASIC23.87■■□□□ 1.41
Trim52Q8CDV4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Trim52Q8CDV4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim52Q8CDV4 Gm37563-201ENSMUST00000192580 1513 ntBASIC23.87■■□□□ 1.41
Trim52Q8CDV4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim52Q8CDV4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim52Q8CDV4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
Trim52Q8CDV4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.87■■□□□ 1.41
Trim52Q8CDV4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Trim52Q8CDV4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trim52Q8CDV4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trim52Q8CDV4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC23.86■■□□□ 1.41
Trim52Q8CDV4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC23.86■■□□□ 1.41
Trim52Q8CDV4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trim52Q8CDV4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Trim52Q8CDV4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trim52Q8CDV4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.85■■□□□ 1.41
Trim52Q8CDV4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Trim52Q8CDV4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC23.85■■□□□ 1.41
Trim52Q8CDV4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trim52Q8CDV4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Trim52Q8CDV4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Trim52Q8CDV4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trim52Q8CDV4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Trim52Q8CDV4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Trim52Q8CDV4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC23.84■■□□□ 1.41
Trim52Q8CDV4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim52Q8CDV4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC23.84■■□□□ 1.41
Trim52Q8CDV4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Trim52Q8CDV4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Trim52Q8CDV4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC23.84■■□□□ 1.41
Trim52Q8CDV4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Trim52Q8CDV4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.84■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms