Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q8CD60 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Q8CD60 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Q8CD60 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q8CD60 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q8CD60 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Q8CD60 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Q8CD60 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Q8CD60 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q8CD60 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q8CD60 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.2■□□□□ 0.82
Q8CD60 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q8CD60 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Q8CD60 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CD60 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CD60 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CD60 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.19■□□□□ 0.82
Q8CD60 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CD60 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CD60 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CD60 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CD60 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CD60 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CD60 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
Q8CD60 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CD60 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CD60 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Q8CD60 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Q8CD60 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Q8CD60 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CD60 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Q8CD60 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Q8CD60 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CD60 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CD60 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CD60 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q8CD60 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q8CD60 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q8CD60 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.17■□□□□ 0.82
Q8CD60 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.17■□□□□ 0.82
Q8CD60 Gm15039-201ENSMUST00000118914 875 ntBASIC20.17■□□□□ 0.82
Q8CD60 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.17■□□□□ 0.82
Q8CD60 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Q8CD60 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.17■□□□□ 0.82
Q8CD60 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.17■□□□□ 0.82
Q8CD60 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Q8CD60 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q8CD60 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q8CD60 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Q8CD60 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CD60 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.16■□□□□ 0.82
Q8CD60 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CD60 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Q8CD60 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CD60 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.16■□□□□ 0.82
Q8CD60 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CD60 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CD60 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.16■□□□□ 0.82
Q8CD60 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CD60 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CD60 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Q8CD60 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CD60 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Q8CD60 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8CD60 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8CD60 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8CD60 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.15■□□□□ 0.82
Q8CD60 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Q8CD60 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Q8CD60 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8CD60 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8CD60 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Q8CD60 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8CD60 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8CD60 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Q8CD60 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.14■□□□□ 0.81
Q8CD60 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.14■□□□□ 0.81
Q8CD60 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.14■□□□□ 0.81
Q8CD60 Iqck-206ENSMUST00000208658 2891 ntBASIC20.14■□□□□ 0.81
Q8CD60 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Q8CD60 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8CD60 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Q8CD60 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8CD60 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Q8CD60 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Q8CD60 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Q8CD60 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q8CD60 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.13■□□□□ 0.81
Q8CD60 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q8CD60 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.13■□□□□ 0.81
Q8CD60 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q8CD60 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q8CD60 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q8CD60 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Q8CD60 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Q8CD60 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q8CD60 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.12■□□□□ 0.81
Q8CD60 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.12■□□□□ 0.81
Q8CD60 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.12■□□□□ 0.81
Q8CD60 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms