Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Uba3Q8C878 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.24■□□□□ 0.83
Uba3Q8C878 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Uba3Q8C878 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Uba3Q8C878 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Uba3Q8C878 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.24■□□□□ 0.83
Uba3Q8C878 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Uba3Q8C878 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Uba3Q8C878 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Uba3Q8C878 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Uba3Q8C878 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Uba3Q8C878 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Uba3Q8C878 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Uba3Q8C878 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Uba3Q8C878 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.23■□□□□ 0.83
Uba3Q8C878 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Uba3Q8C878 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Uba3Q8C878 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Uba3Q8C878 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Uba3Q8C878 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Uba3Q8C878 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Uba3Q8C878 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uba3Q8C878 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uba3Q8C878 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uba3Q8C878 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.22■□□□□ 0.83
Uba3Q8C878 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.22■□□□□ 0.83
Uba3Q8C878 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Uba3Q8C878 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uba3Q8C878 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Uba3Q8C878 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.22■□□□□ 0.83
Uba3Q8C878 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Uba3Q8C878 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uba3Q8C878 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.22■□□□□ 0.83
Uba3Q8C878 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uba3Q8C878 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Uba3Q8C878 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Uba3Q8C878 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uba3Q8C878 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Uba3Q8C878 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Uba3Q8C878 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Uba3Q8C878 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Uba3Q8C878 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.21■□□□□ 0.83
Uba3Q8C878 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.21■□□□□ 0.83
Uba3Q8C878 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Uba3Q8C878 Gm9988-201ENSMUST00000069786 435 ntBASIC20.21■□□□□ 0.83
Uba3Q8C878 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Uba3Q8C878 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Uba3Q8C878 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Uba3Q8C878 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Uba3Q8C878 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Uba3Q8C878 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Uba3Q8C878 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.2■□□□□ 0.82
Uba3Q8C878 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Uba3Q8C878 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Uba3Q8C878 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Uba3Q8C878 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.2■□□□□ 0.82
Uba3Q8C878 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.2■□□□□ 0.82
Uba3Q8C878 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.2■□□□□ 0.82
Uba3Q8C878 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Uba3Q8C878 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Uba3Q8C878 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Uba3Q8C878 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Uba3Q8C878 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Uba3Q8C878 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Uba3Q8C878 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Uba3Q8C878 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.19■□□□□ 0.82
Uba3Q8C878 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Uba3Q8C878 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
Uba3Q8C878 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Uba3Q8C878 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.19■□□□□ 0.82
Uba3Q8C878 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Uba3Q8C878 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Uba3Q8C878 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Uba3Q8C878 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Uba3Q8C878 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Uba3Q8C878 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Uba3Q8C878 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Uba3Q8C878 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Uba3Q8C878 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.18■□□□□ 0.82
Uba3Q8C878 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Uba3Q8C878 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Uba3Q8C878 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Uba3Q8C878 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Uba3Q8C878 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Uba3Q8C878 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Uba3Q8C878 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Uba3Q8C878 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Uba3Q8C878 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Uba3Q8C878 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Uba3Q8C878 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Uba3Q8C878 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Uba3Q8C878 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Uba3Q8C878 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Uba3Q8C878 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.17■□□□□ 0.82
Uba3Q8C878 Gm10493-201ENSMUST00000097270 612 ntBASIC20.17■□□□□ 0.82
Uba3Q8C878 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Uba3Q8C878 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Uba3Q8C878 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Uba3Q8C878 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Uba3Q8C878 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms