Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.49■□□□□ 0.87
Fam78aQ8C552 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Fam78aQ8C552 Gm20049-201ENSMUST00000219950 730 ntBASIC20.49■□□□□ 0.87
Fam78aQ8C552 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam78aQ8C552 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Fam78aQ8C552 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam78aQ8C552 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Fam78aQ8C552 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Fam78aQ8C552 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam78aQ8C552 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Fam78aQ8C552 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam78aQ8C552 Gm22240-201ENSMUST00000175225 82 ntBASIC20.48■□□□□ 0.87
Fam78aQ8C552 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam78aQ8C552 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam78aQ8C552 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam78aQ8C552 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Fam78aQ8C552 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.48■□□□□ 0.87
Fam78aQ8C552 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Fam78aQ8C552 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Fam78aQ8C552 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam78aQ8C552 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.47■□□□□ 0.87
Fam78aQ8C552 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam78aQ8C552 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.47■□□□□ 0.87
Fam78aQ8C552 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.47■□□□□ 0.87
Fam78aQ8C552 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam78aQ8C552 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam78aQ8C552 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Fam78aQ8C552 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Fam78aQ8C552 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.46■□□□□ 0.87
Fam78aQ8C552 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam78aQ8C552 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam78aQ8C552 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Fam78aQ8C552 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam78aQ8C552 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.46■□□□□ 0.87
Fam78aQ8C552 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam78aQ8C552 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Fam78aQ8C552 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam78aQ8C552 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam78aQ8C552 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.45■□□□□ 0.86
Fam78aQ8C552 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.45■□□□□ 0.86
Fam78aQ8C552 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.45■□□□□ 0.86
Fam78aQ8C552 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.45■□□□□ 0.86
Fam78aQ8C552 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam78aQ8C552 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Fam78aQ8C552 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam78aQ8C552 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Fam78aQ8C552 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam78aQ8C552 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam78aQ8C552 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam78aQ8C552 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Fam78aQ8C552 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Fam78aQ8C552 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam78aQ8C552 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam78aQ8C552 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Fam78aQ8C552 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam78aQ8C552 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Fam78aQ8C552 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Fam78aQ8C552 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Fam78aQ8C552 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Fam78aQ8C552 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Fam78aQ8C552 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Fam78aQ8C552 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam78aQ8C552 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam78aQ8C552 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Fam78aQ8C552 Gm8520-201ENSMUST00000186517 868 ntBASIC20.43■□□□□ 0.86
Fam78aQ8C552 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam78aQ8C552 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam78aQ8C552 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam78aQ8C552 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam78aQ8C552 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam78aQ8C552 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam78aQ8C552 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam78aQ8C552 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam78aQ8C552 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam78aQ8C552 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
Fam78aQ8C552 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.42■□□□□ 0.86
Fam78aQ8C552 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Fam78aQ8C552 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Fam78aQ8C552 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam78aQ8C552 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Fam78aQ8C552 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Fam78aQ8C552 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam78aQ8C552 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam78aQ8C552 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Fam78aQ8C552 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam78aQ8C552 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.41■□□□□ 0.86
Fam78aQ8C552 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam78aQ8C552 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam78aQ8C552 Gm26524-201ENSMUST00000192339 390 ntBASIC20.41■□□□□ 0.86
Fam78aQ8C552 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.41■□□□□ 0.86
Fam78aQ8C552 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam78aQ8C552 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam78aQ8C552 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.41■□□□□ 0.86
Fam78aQ8C552 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam78aQ8C552 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Fam78aQ8C552 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Fam78aQ8C552 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Fam78aQ8C552 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.4■□□□□ 0.86
Fam78aQ8C552 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Fam78aQ8C552 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms