Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Gm7860-201ENSMUST00000121190 879 ntBASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Gm26571-201ENSMUST00000181399 666 ntBASIC20.26■□□□□ 0.83
Brat1Q8C3R1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Brat1Q8C3R1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Brat1Q8C3R1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Brat1Q8C3R1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.25■□□□□ 0.83
Brat1Q8C3R1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.25■□□□□ 0.83
Brat1Q8C3R1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Brat1Q8C3R1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Brat1Q8C3R1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Brat1Q8C3R1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Brat1Q8C3R1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Brat1Q8C3R1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Brat1Q8C3R1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Brat1Q8C3R1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Brat1Q8C3R1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Gm10849-201ENSMUST00000100397 618 ntBASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brat1Q8C3R1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Brat1Q8C3R1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Brat1Q8C3R1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Brat1Q8C3R1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Brat1Q8C3R1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Brat1Q8C3R1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Brat1Q8C3R1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Brat1Q8C3R1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Brat1Q8C3R1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.23■□□□□ 0.83
Brat1Q8C3R1 Gm42569-201ENSMUST00000200539 472 ntBASIC20.23■□□□□ 0.83
Brat1Q8C3R1 AV356131-201ENSMUST00000206201 750 ntBASIC20.23■□□□□ 0.83
Brat1Q8C3R1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Brat1Q8C3R1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Brat1Q8C3R1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Brat1Q8C3R1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Brat1Q8C3R1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Brat1Q8C3R1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Brat1Q8C3R1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Brat1Q8C3R1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.22■□□□□ 0.83
Brat1Q8C3R1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Brat1Q8C3R1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Brat1Q8C3R1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.22■□□□□ 0.83
Brat1Q8C3R1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Brat1Q8C3R1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Brat1Q8C3R1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.22■□□□□ 0.83
Brat1Q8C3R1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Brat1Q8C3R1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.21■□□□□ 0.83
Brat1Q8C3R1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.21■□□□□ 0.83
Brat1Q8C3R1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.21■□□□□ 0.83
Brat1Q8C3R1 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.21■□□□□ 0.83
Brat1Q8C3R1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.21■□□□□ 0.83
Brat1Q8C3R1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.21■□□□□ 0.83
Brat1Q8C3R1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Brat1Q8C3R1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Brat1Q8C3R1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Brat1Q8C3R1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Brat1Q8C3R1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Brat1Q8C3R1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Brat1Q8C3R1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.2■□□□□ 0.82
Brat1Q8C3R1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.2■□□□□ 0.82
Brat1Q8C3R1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Brat1Q8C3R1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brat1Q8C3R1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Brat1Q8C3R1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Brat1Q8C3R1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brat1Q8C3R1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brat1Q8C3R1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Brat1Q8C3R1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brat1Q8C3R1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brat1Q8C3R1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Brat1Q8C3R1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Brat1Q8C3R1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Brat1Q8C3R1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.19■□□□□ 0.82
Brat1Q8C3R1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Brat1Q8C3R1 Gm13146-201ENSMUST00000118508 780 ntBASIC20.19■□□□□ 0.82
Brat1Q8C3R1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Brat1Q8C3R1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Brat1Q8C3R1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 1052.4 ms