Protein–RNA interactions for Protein: Q8BY02

Nkrf, NF-kappa-B-repressing factor, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NkrfQ8BY02 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NkrfQ8BY02 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NkrfQ8BY02 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NkrfQ8BY02 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.57■■□□□ 1.04
NkrfQ8BY02 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NkrfQ8BY02 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NkrfQ8BY02 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NkrfQ8BY02 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NkrfQ8BY02 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NkrfQ8BY02 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.57■■□□□ 1.04
NkrfQ8BY02 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NkrfQ8BY02 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.57■■□□□ 1.04
NkrfQ8BY02 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
NkrfQ8BY02 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.57■■□□□ 1.04
NkrfQ8BY02 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NkrfQ8BY02 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NkrfQ8BY02 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NkrfQ8BY02 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NkrfQ8BY02 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.56■■□□□ 1.04
NkrfQ8BY02 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NkrfQ8BY02 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
NkrfQ8BY02 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.56■■□□□ 1.04
NkrfQ8BY02 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NkrfQ8BY02 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NkrfQ8BY02 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NkrfQ8BY02 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NkrfQ8BY02 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NkrfQ8BY02 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NkrfQ8BY02 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NkrfQ8BY02 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.55■■□□□ 1.04
NkrfQ8BY02 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.55■■□□□ 1.04
NkrfQ8BY02 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NkrfQ8BY02 Gm4968-201ENSMUST00000071458 858 ntBASIC21.55■■□□□ 1.04
NkrfQ8BY02 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NkrfQ8BY02 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NkrfQ8BY02 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NkrfQ8BY02 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NkrfQ8BY02 Gm7290-201ENSMUST00000104990 617 ntBASIC21.54■■□□□ 1.04
NkrfQ8BY02 Gm12918-201ENSMUST00000120234 636 ntBASIC21.54■■□□□ 1.04
NkrfQ8BY02 Gm15710-201ENSMUST00000121821 636 ntBASIC21.54■■□□□ 1.04
NkrfQ8BY02 Gm5075-201ENSMUST00000196916 622 ntBASIC21.54■■□□□ 1.04
NkrfQ8BY02 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.54■■□□□ 1.04
NkrfQ8BY02 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.54■■□□□ 1.04
NkrfQ8BY02 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.54■■□□□ 1.04
NkrfQ8BY02 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NkrfQ8BY02 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NkrfQ8BY02 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.54■■□□□ 1.04
NkrfQ8BY02 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NkrfQ8BY02 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NkrfQ8BY02 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NkrfQ8BY02 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.54■■□□□ 1.04
NkrfQ8BY02 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.54■■□□□ 1.04
NkrfQ8BY02 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NkrfQ8BY02 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NkrfQ8BY02 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NkrfQ8BY02 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NkrfQ8BY02 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NkrfQ8BY02 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NkrfQ8BY02 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NkrfQ8BY02 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NkrfQ8BY02 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
NkrfQ8BY02 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.52■■□□□ 1.04
NkrfQ8BY02 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NkrfQ8BY02 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NkrfQ8BY02 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NkrfQ8BY02 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NkrfQ8BY02 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NkrfQ8BY02 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NkrfQ8BY02 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
NkrfQ8BY02 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.52■■□□□ 1.04
NkrfQ8BY02 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NkrfQ8BY02 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
NkrfQ8BY02 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.52■■□□□ 1.04
NkrfQ8BY02 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.52■■□□□ 1.04
NkrfQ8BY02 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.52■■□□□ 1.04
NkrfQ8BY02 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NkrfQ8BY02 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
NkrfQ8BY02 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NkrfQ8BY02 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NkrfQ8BY02 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
NkrfQ8BY02 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.52■■□□□ 1.03
NkrfQ8BY02 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.52■■□□□ 1.03
NkrfQ8BY02 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
NkrfQ8BY02 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NkrfQ8BY02 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NkrfQ8BY02 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.51■■□□□ 1.03
NkrfQ8BY02 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
NkrfQ8BY02 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NkrfQ8BY02 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.51■■□□□ 1.03
NkrfQ8BY02 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NkrfQ8BY02 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NkrfQ8BY02 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NkrfQ8BY02 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
NkrfQ8BY02 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.5■■□□□ 1.03
NkrfQ8BY02 Gm38205-201ENSMUST00000192243 258 ntBASIC21.5■■□□□ 1.03
NkrfQ8BY02 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.5■■□□□ 1.03
NkrfQ8BY02 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NkrfQ8BY02 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NkrfQ8BY02 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NkrfQ8BY02 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms