Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsfm13Q8BXS2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsfm13Q8BXS2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsfm13Q8BXS2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsfm13Q8BXS2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsfm13Q8BXS2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsfm13Q8BXS2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsfm13Q8BXS2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsfm13Q8BXS2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfsfm13Q8BXS2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfsfm13Q8BXS2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfsfm13Q8BXS2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tnfsfm13Q8BXS2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfsfm13Q8BXS2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsfm13Q8BXS2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsfm13Q8BXS2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Tnfsfm13Q8BXS2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsfm13Q8BXS2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.04■□□□□ 0.32
Tnfsfm13Q8BXS2 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.04■□□□□ 0.32
Tnfsfm13Q8BXS2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsfm13Q8BXS2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsfm13Q8BXS2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsfm13Q8BXS2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsfm13Q8BXS2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsfm13Q8BXS2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsfm13Q8BXS2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfsfm13Q8BXS2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfsfm13Q8BXS2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfsfm13Q8BXS2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfsfm13Q8BXS2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.02■□□□□ 0.32
Tnfsfm13Q8BXS2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.02■□□□□ 0.32
Tnfsfm13Q8BXS2 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.02■□□□□ 0.32
Tnfsfm13Q8BXS2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfsfm13Q8BXS2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Tnfsfm13Q8BXS2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfsfm13Q8BXS2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfsfm13Q8BXS2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfsfm13Q8BXS2 Golph3-205ENSMUST00000228671 2842 ntBASIC17.02■□□□□ 0.31
Tnfsfm13Q8BXS2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsfm13Q8BXS2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfsfm13Q8BXS2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17■□□□□ 0.31
Tnfsfm13Q8BXS2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17■□□□□ 0.31
Tnfsfm13Q8BXS2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17■□□□□ 0.31
Tnfsfm13Q8BXS2 Spcs1-204ENSMUST00000226782 949 ntBASIC17■□□□□ 0.31
Tnfsfm13Q8BXS2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfsfm13Q8BXS2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfsfm13Q8BXS2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms