Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap1Q8BTW8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap1Q8BTW8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap1Q8BTW8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cdk5rap1Q8BTW8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdk5rap1Q8BTW8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdk5rap1Q8BTW8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdk5rap1Q8BTW8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdk5rap1Q8BTW8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdk5rap1Q8BTW8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Cdk5rap1Q8BTW8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cdk5rap1Q8BTW8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.23■□□□□ 0.51
Cdk5rap1Q8BTW8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk5rap1Q8BTW8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cdk5rap1Q8BTW8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk5rap1Q8BTW8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk5rap1Q8BTW8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk5rap1Q8BTW8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk5rap1Q8BTW8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk5rap1Q8BTW8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk5rap1Q8BTW8 Gm7860-201ENSMUST00000121190 879 ntBASIC18.21■□□□□ 0.51
Cdk5rap1Q8BTW8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.21■□□□□ 0.51
Cdk5rap1Q8BTW8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk5rap1Q8BTW8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cdk5rap1Q8BTW8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk5rap1Q8BTW8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cdk5rap1Q8BTW8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Cdk5rap1Q8BTW8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdk5rap1Q8BTW8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk5rap1Q8BTW8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk5rap1Q8BTW8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cdk5rap1Q8BTW8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk5rap1Q8BTW8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk5rap1Q8BTW8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk5rap1Q8BTW8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.2■□□□□ 0.5
Cdk5rap1Q8BTW8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk5rap1Q8BTW8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk5rap1Q8BTW8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk5rap1Q8BTW8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk5rap1Q8BTW8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk5rap1Q8BTW8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk5rap1Q8BTW8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk5rap1Q8BTW8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk5rap1Q8BTW8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk5rap1Q8BTW8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cdk5rap1Q8BTW8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap1Q8BTW8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap1Q8BTW8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap1Q8BTW8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap1Q8BTW8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap1Q8BTW8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.19■□□□□ 0.5
Cdk5rap1Q8BTW8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Cdk5rap1Q8BTW8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap1Q8BTW8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap1Q8BTW8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap1Q8BTW8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap1Q8BTW8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap1Q8BTW8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdk5rap1Q8BTW8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdk5rap1Q8BTW8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
Cdk5rap1Q8BTW8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cdk5rap1Q8BTW8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Cdk5rap1Q8BTW8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdk5rap1Q8BTW8 Gm10602-201ENSMUST00000098239 609 ntBASIC18.18■□□□□ 0.5
Cdk5rap1Q8BTW8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdk5rap1Q8BTW8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Cdk5rap1Q8BTW8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdk5rap1Q8BTW8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cdk5rap1Q8BTW8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Cdk5rap1Q8BTW8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdk5rap1Q8BTW8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.17■□□□□ 0.5
Cdk5rap1Q8BTW8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdk5rap1Q8BTW8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cdk5rap1Q8BTW8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdk5rap1Q8BTW8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdk5rap1Q8BTW8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdk5rap1Q8BTW8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdk5rap1Q8BTW8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cdk5rap1Q8BTW8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdk5rap1Q8BTW8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Gm13534-201ENSMUST00000121169 513 ntBASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap1Q8BTW8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdk5rap1Q8BTW8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cdk5rap1Q8BTW8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms