Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.01■□□□□ 0.47
Ppp1r3eQ8BRJ4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ppp1r3eQ8BRJ4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ppp1r3eQ8BRJ4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ppp1r3eQ8BRJ4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ppp1r3eQ8BRJ4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ppp1r3eQ8BRJ4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ppp1r3eQ8BRJ4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ppp1r3eQ8BRJ4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ppp1r3eQ8BRJ4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ppp1r3eQ8BRJ4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ppp1r3eQ8BRJ4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ppp1r3eQ8BRJ4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ppp1r3eQ8BRJ4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ppp1r3eQ8BRJ4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ppp1r3eQ8BRJ4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ppp1r3eQ8BRJ4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ppp1r3eQ8BRJ4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
Ppp1r3eQ8BRJ4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18■□□□□ 0.47
Ppp1r3eQ8BRJ4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ppp1r3eQ8BRJ4 Rarb-207ENSMUST00000225921 2756 ntBASIC18■□□□□ 0.47
Ppp1r3eQ8BRJ4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ppp1r3eQ8BRJ4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ppp1r3eQ8BRJ4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ppp1r3eQ8BRJ4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ppp1r3eQ8BRJ4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ppp1r3eQ8BRJ4 Grk6-206ENSMUST00000224995 2971 ntBASIC17.99■□□□□ 0.47
Ppp1r3eQ8BRJ4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ppp1r3eQ8BRJ4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ppp1r3eQ8BRJ4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.99■□□□□ 0.47
Ppp1r3eQ8BRJ4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ppp1r3eQ8BRJ4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ppp1r3eQ8BRJ4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ppp1r3eQ8BRJ4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ppp1r3eQ8BRJ4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ppp1r3eQ8BRJ4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.99■□□□□ 0.47
Ppp1r3eQ8BRJ4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ppp1r3eQ8BRJ4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ppp1r3eQ8BRJ4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.98■□□□□ 0.47
Ppp1r3eQ8BRJ4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.98■□□□□ 0.47
Ppp1r3eQ8BRJ4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.98■□□□□ 0.47
Ppp1r3eQ8BRJ4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ppp1r3eQ8BRJ4 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.98■□□□□ 0.47
Ppp1r3eQ8BRJ4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ppp1r3eQ8BRJ4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ppp1r3eQ8BRJ4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ppp1r3eQ8BRJ4 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.96■□□□□ 0.47
Ppp1r3eQ8BRJ4 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.96■□□□□ 0.47
Ppp1r3eQ8BRJ4 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.96■□□□□ 0.47
Ppp1r3eQ8BRJ4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ppp1r3eQ8BRJ4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ppp1r3eQ8BRJ4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ppp1r3eQ8BRJ4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ppp1r3eQ8BRJ4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Ppp1r3eQ8BRJ4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ppp1r3eQ8BRJ4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ppp1r3eQ8BRJ4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.95■□□□□ 0.46
Ppp1r3eQ8BRJ4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ppp1r3eQ8BRJ4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ppp1r3eQ8BRJ4 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.95■□□□□ 0.46
Ppp1r3eQ8BRJ4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ppp1r3eQ8BRJ4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.95■□□□□ 0.46
Ppp1r3eQ8BRJ4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ppp1r3eQ8BRJ4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ppp1r3eQ8BRJ4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ppp1r3eQ8BRJ4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ppp1r3eQ8BRJ4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ppp1r3eQ8BRJ4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ppp1r3eQ8BRJ4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.94■□□□□ 0.46
Ppp1r3eQ8BRJ4 Gm7417-201ENSMUST00000192950 473 ntBASIC17.94■□□□□ 0.46
Ppp1r3eQ8BRJ4 Gm13241-201ENSMUST00000094493 780 ntBASIC17.94■□□□□ 0.46
Ppp1r3eQ8BRJ4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ppp1r3eQ8BRJ4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ppp1r3eQ8BRJ4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ppp1r3eQ8BRJ4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ppp1r3eQ8BRJ4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ppp1r3eQ8BRJ4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.93■□□□□ 0.46
Ppp1r3eQ8BRJ4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms