Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Suds3Q8BR65 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Suds3Q8BR65 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Suds3Q8BR65 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Suds3Q8BR65 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Suds3Q8BR65 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Suds3Q8BR65 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Suds3Q8BR65 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Suds3Q8BR65 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Suds3Q8BR65 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Suds3Q8BR65 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Suds3Q8BR65 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Suds3Q8BR65 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
Suds3Q8BR65 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Suds3Q8BR65 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Suds3Q8BR65 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Suds3Q8BR65 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Suds3Q8BR65 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.6■□□□□ 0.73
Suds3Q8BR65 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.6■□□□□ 0.73
Suds3Q8BR65 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.6■□□□□ 0.73
Suds3Q8BR65 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Suds3Q8BR65 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Suds3Q8BR65 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.59■□□□□ 0.73
Suds3Q8BR65 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.59■□□□□ 0.73
Suds3Q8BR65 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Suds3Q8BR65 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Suds3Q8BR65 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Suds3Q8BR65 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Suds3Q8BR65 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Suds3Q8BR65 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Suds3Q8BR65 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Suds3Q8BR65 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Suds3Q8BR65 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Suds3Q8BR65 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Suds3Q8BR65 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Suds3Q8BR65 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Suds3Q8BR65 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Suds3Q8BR65 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.58■□□□□ 0.72
Suds3Q8BR65 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.58■□□□□ 0.72
Suds3Q8BR65 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Suds3Q8BR65 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Suds3Q8BR65 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Suds3Q8BR65 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Suds3Q8BR65 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Suds3Q8BR65 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Suds3Q8BR65 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Suds3Q8BR65 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.57■□□□□ 0.72
Suds3Q8BR65 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Suds3Q8BR65 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.57■□□□□ 0.72
Suds3Q8BR65 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Suds3Q8BR65 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Suds3Q8BR65 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Suds3Q8BR65 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Suds3Q8BR65 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Suds3Q8BR65 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.57■□□□□ 0.72
Suds3Q8BR65 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Suds3Q8BR65 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.57■□□□□ 0.72
Suds3Q8BR65 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Suds3Q8BR65 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Suds3Q8BR65 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Suds3Q8BR65 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Suds3Q8BR65 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Suds3Q8BR65 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Suds3Q8BR65 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Suds3Q8BR65 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Suds3Q8BR65 Spcs1-204ENSMUST00000226782 949 ntBASIC19.56■□□□□ 0.72
Suds3Q8BR65 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Suds3Q8BR65 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Suds3Q8BR65 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Suds3Q8BR65 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Suds3Q8BR65 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Suds3Q8BR65 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Suds3Q8BR65 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Suds3Q8BR65 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.55■□□□□ 0.72
Suds3Q8BR65 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Suds3Q8BR65 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Suds3Q8BR65 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Suds3Q8BR65 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Suds3Q8BR65 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Suds3Q8BR65 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Suds3Q8BR65 Gm43173-201ENSMUST00000202246 593 ntBASIC19.55■□□□□ 0.72
Suds3Q8BR65 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Suds3Q8BR65 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Suds3Q8BR65 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Suds3Q8BR65 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Suds3Q8BR65 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Suds3Q8BR65 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Suds3Q8BR65 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Suds3Q8BR65 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.54■□□□□ 0.72
Suds3Q8BR65 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.54■□□□□ 0.72
Suds3Q8BR65 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Suds3Q8BR65 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.54■□□□□ 0.72
Suds3Q8BR65 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Suds3Q8BR65 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Suds3Q8BR65 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Suds3Q8BR65 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Suds3Q8BR65 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Suds3Q8BR65 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Suds3Q8BR65 Gm40848-201ENSMUST00000221998 324 ntBASIC19.53■□□□□ 0.72
Suds3Q8BR65 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms