Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdkl3Q8BLF2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdkl3Q8BLF2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdkl3Q8BLF2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.56■□□□□ 0.24
Cdkl3Q8BLF2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdkl3Q8BLF2 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.56■□□□□ 0.24
Cdkl3Q8BLF2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Cdkl3Q8BLF2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdkl3Q8BLF2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdkl3Q8BLF2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Mir6538-201ENSMUST00000183713 110 ntBASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdkl3Q8BLF2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Gm7332-201ENSMUST00000118351 454 ntBASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cdkl3Q8BLF2 BC021767-201ENSMUST00000126387 1716 ntBASIC16.53■□□□□ 0.24
Cdkl3Q8BLF2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdkl3Q8BLF2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdkl3Q8BLF2 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.53■□□□□ 0.24
Cdkl3Q8BLF2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cdkl3Q8BLF2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdkl3Q8BLF2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdkl3Q8BLF2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdkl3Q8BLF2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdkl3Q8BLF2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdkl3Q8BLF2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdkl3Q8BLF2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdkl3Q8BLF2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl3Q8BLF2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl3Q8BLF2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl3Q8BLF2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl3Q8BLF2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
Cdkl3Q8BLF2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl3Q8BLF2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl3Q8BLF2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl3Q8BLF2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl3Q8BLF2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cdkl3Q8BLF2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl3Q8BLF2 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.52■□□□□ 0.23
Cdkl3Q8BLF2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cdkl3Q8BLF2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdkl3Q8BLF2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdkl3Q8BLF2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdkl3Q8BLF2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cdkl3Q8BLF2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdkl3Q8BLF2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl3Q8BLF2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.51■□□□□ 0.23
Cdkl3Q8BLF2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Cdkl3Q8BLF2 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.51■□□□□ 0.23
Cdkl3Q8BLF2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl3Q8BLF2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.51■□□□□ 0.23
Cdkl3Q8BLF2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl3Q8BLF2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl3Q8BLF2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl3Q8BLF2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms