Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Pum3Q8BKS9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pum3Q8BKS9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pum3Q8BKS9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pum3Q8BKS9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pum3Q8BKS9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pum3Q8BKS9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pum3Q8BKS9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Pum3Q8BKS9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pum3Q8BKS9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.33■□□□□ 0.85
Pum3Q8BKS9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.33■□□□□ 0.85
Pum3Q8BKS9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pum3Q8BKS9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pum3Q8BKS9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pum3Q8BKS9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pum3Q8BKS9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pum3Q8BKS9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
Pum3Q8BKS9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Pum3Q8BKS9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.33■□□□□ 0.84
Pum3Q8BKS9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pum3Q8BKS9 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.32■□□□□ 0.84
Pum3Q8BKS9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Pum3Q8BKS9 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.32■□□□□ 0.84
Pum3Q8BKS9 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.32■□□□□ 0.84
Pum3Q8BKS9 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.32■□□□□ 0.84
Pum3Q8BKS9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.32■□□□□ 0.84
Pum3Q8BKS9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pum3Q8BKS9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pum3Q8BKS9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pum3Q8BKS9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.32■□□□□ 0.84
Pum3Q8BKS9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pum3Q8BKS9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pum3Q8BKS9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pum3Q8BKS9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pum3Q8BKS9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pum3Q8BKS9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pum3Q8BKS9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pum3Q8BKS9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pum3Q8BKS9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pum3Q8BKS9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
Pum3Q8BKS9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Pum3Q8BKS9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.31■□□□□ 0.84
Pum3Q8BKS9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.31■□□□□ 0.84
Pum3Q8BKS9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pum3Q8BKS9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.3■□□□□ 0.84
Pum3Q8BKS9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pum3Q8BKS9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pum3Q8BKS9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pum3Q8BKS9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Pum3Q8BKS9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pum3Q8BKS9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Pum3Q8BKS9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pum3Q8BKS9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pum3Q8BKS9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.3■□□□□ 0.84
Pum3Q8BKS9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pum3Q8BKS9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pum3Q8BKS9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pum3Q8BKS9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pum3Q8BKS9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pum3Q8BKS9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pum3Q8BKS9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pum3Q8BKS9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.29■□□□□ 0.84
Pum3Q8BKS9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pum3Q8BKS9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.29■□□□□ 0.84
Pum3Q8BKS9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pum3Q8BKS9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pum3Q8BKS9 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.28■□□□□ 0.84
Pum3Q8BKS9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pum3Q8BKS9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Pum3Q8BKS9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pum3Q8BKS9 Gm8495-201ENSMUST00000188740 694 ntBASIC20.28■□□□□ 0.84
Pum3Q8BKS9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pum3Q8BKS9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pum3Q8BKS9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pum3Q8BKS9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pum3Q8BKS9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Pum3Q8BKS9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pum3Q8BKS9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pum3Q8BKS9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pum3Q8BKS9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pum3Q8BKS9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pum3Q8BKS9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pum3Q8BKS9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pum3Q8BKS9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pum3Q8BKS9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pum3Q8BKS9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pum3Q8BKS9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.27■□□□□ 0.84
Pum3Q8BKS9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pum3Q8BKS9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pum3Q8BKS9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pum3Q8BKS9 Reep4-203ENSMUST00000226563 1444 ntBASIC20.27■□□□□ 0.83
Pum3Q8BKS9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.83
Pum3Q8BKS9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pum3Q8BKS9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pum3Q8BKS9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pum3Q8BKS9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pum3Q8BKS9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pum3Q8BKS9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
Pum3Q8BKS9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.26■□□□□ 0.83
Pum3Q8BKS9 Gm42778-201ENSMUST00000199644 553 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms