Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf38Q8BI21 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf38Q8BI21 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf38Q8BI21 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf38Q8BI21 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf38Q8BI21 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf38Q8BI21 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf38Q8BI21 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.5■□□□□ 0.55
Rnf38Q8BI21 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf38Q8BI21 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rnf38Q8BI21 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rnf38Q8BI21 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf38Q8BI21 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rnf38Q8BI21 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf38Q8BI21 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf38Q8BI21 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf38Q8BI21 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf38Q8BI21 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.49■□□□□ 0.55
Rnf38Q8BI21 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.49■□□□□ 0.55
Rnf38Q8BI21 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf38Q8BI21 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf38Q8BI21 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rnf38Q8BI21 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf38Q8BI21 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rnf38Q8BI21 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf38Q8BI21 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Serp2-204ENSMUST00000228055 705 ntBASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf38Q8BI21 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf38Q8BI21 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf38Q8BI21 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
Rnf38Q8BI21 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.47■□□□□ 0.55
Rnf38Q8BI21 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
Rnf38Q8BI21 Gm9847-201ENSMUST00000052528 599 ntBASIC18.47■□□□□ 0.55
Rnf38Q8BI21 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf38Q8BI21 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf38Q8BI21 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
Rnf38Q8BI21 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf38Q8BI21 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf38Q8BI21 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf38Q8BI21 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf38Q8BI21 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Rnf38Q8BI21 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf38Q8BI21 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.46■□□□□ 0.55
Rnf38Q8BI21 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf38Q8BI21 Golgb1-201ENSMUST00000023534 498 ntBASIC18.46■□□□□ 0.55
Rnf38Q8BI21 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf38Q8BI21 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf38Q8BI21 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf38Q8BI21 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rnf38Q8BI21 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rnf38Q8BI21 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rnf38Q8BI21 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Rnf38Q8BI21 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.45■□□□□ 0.54
Rnf38Q8BI21 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf38Q8BI21 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rnf38Q8BI21 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf38Q8BI21 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.45■□□□□ 0.54
Rnf38Q8BI21 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf38Q8BI21 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf38Q8BI21 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rnf38Q8BI21 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf38Q8BI21 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.45■□□□□ 0.54
Rnf38Q8BI21 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf38Q8BI21 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf38Q8BI21 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf38Q8BI21 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf38Q8BI21 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf38Q8BI21 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf38Q8BI21 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf38Q8BI21 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf38Q8BI21 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Rnf38Q8BI21 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf38Q8BI21 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf38Q8BI21 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf38Q8BI21 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf38Q8BI21 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf38Q8BI21 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf38Q8BI21 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf38Q8BI21 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.44■□□□□ 0.54
Rnf38Q8BI21 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms