Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim23Q8BGX0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
Trim23Q8BGX0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim23Q8BGX0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim23Q8BGX0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim23Q8BGX0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim23Q8BGX0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim23Q8BGX0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim23Q8BGX0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim23Q8BGX0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim23Q8BGX0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trim23Q8BGX0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trim23Q8BGX0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim23Q8BGX0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.53■□□□□ 0.56
Trim23Q8BGX0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim23Q8BGX0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim23Q8BGX0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim23Q8BGX0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim23Q8BGX0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim23Q8BGX0 Gm26571-201ENSMUST00000181399 666 ntBASIC18.53■□□□□ 0.56
Trim23Q8BGX0 Gm42778-201ENSMUST00000199644 553 ntBASIC18.53■□□□□ 0.56
Trim23Q8BGX0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim23Q8BGX0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim23Q8BGX0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim23Q8BGX0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trim23Q8BGX0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim23Q8BGX0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim23Q8BGX0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim23Q8BGX0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim23Q8BGX0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim23Q8BGX0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim23Q8BGX0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim23Q8BGX0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.52■□□□□ 0.56
Trim23Q8BGX0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim23Q8BGX0 Iqck-206ENSMUST00000208658 2891 ntBASIC18.52■□□□□ 0.56
Trim23Q8BGX0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim23Q8BGX0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Trim23Q8BGX0 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.51■□□□□ 0.55
Trim23Q8BGX0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim23Q8BGX0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim23Q8BGX0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim23Q8BGX0 Gm13146-201ENSMUST00000118508 780 ntBASIC18.51■□□□□ 0.55
Trim23Q8BGX0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim23Q8BGX0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim23Q8BGX0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim23Q8BGX0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trim23Q8BGX0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim23Q8BGX0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim23Q8BGX0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim23Q8BGX0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim23Q8BGX0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Gm18671-201ENSMUST00000214826 683 ntBASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.49■□□□□ 0.55
Trim23Q8BGX0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim23Q8BGX0 Gm7860-201ENSMUST00000121190 879 ntBASIC18.48■□□□□ 0.55
Trim23Q8BGX0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim23Q8BGX0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.48■□□□□ 0.55
Trim23Q8BGX0 Gm38205-201ENSMUST00000192243 258 ntBASIC18.48■□□□□ 0.55
Trim23Q8BGX0 AV356131-201ENSMUST00000206201 750 ntBASIC18.48■□□□□ 0.55
Trim23Q8BGX0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim23Q8BGX0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.48■□□□□ 0.55
Trim23Q8BGX0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim23Q8BGX0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.48■□□□□ 0.55
Trim23Q8BGX0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim23Q8BGX0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms