Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Gm22238-201ENSMUST00000175222 88 ntBASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smndc1Q8BGT7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smndc1Q8BGT7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smndc1Q8BGT7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smndc1Q8BGT7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smndc1Q8BGT7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smndc1Q8BGT7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smndc1Q8BGT7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.52■□□□□ 0.56
Smndc1Q8BGT7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smndc1Q8BGT7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Smndc1Q8BGT7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smndc1Q8BGT7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smndc1Q8BGT7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smndc1Q8BGT7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smndc1Q8BGT7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Smndc1Q8BGT7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smndc1Q8BGT7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Smndc1Q8BGT7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smndc1Q8BGT7 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.51■□□□□ 0.55
Smndc1Q8BGT7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smndc1Q8BGT7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smndc1Q8BGT7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smndc1Q8BGT7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.51■□□□□ 0.55
Smndc1Q8BGT7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.51■□□□□ 0.55
Smndc1Q8BGT7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.51■□□□□ 0.55
Smndc1Q8BGT7 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.51■□□□□ 0.55
Smndc1Q8BGT7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smndc1Q8BGT7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smndc1Q8BGT7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smndc1Q8BGT7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smndc1Q8BGT7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smndc1Q8BGT7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smndc1Q8BGT7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Smndc1Q8BGT7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.49■□□□□ 0.55
Smndc1Q8BGT7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smndc1Q8BGT7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smndc1Q8BGT7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Smndc1Q8BGT7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Smndc1Q8BGT7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smndc1Q8BGT7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smndc1Q8BGT7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.48■□□□□ 0.55
Smndc1Q8BGT7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smndc1Q8BGT7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smndc1Q8BGT7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smndc1Q8BGT7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Smndc1Q8BGT7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smndc1Q8BGT7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.47■□□□□ 0.55
Smndc1Q8BGT7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smndc1Q8BGT7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smndc1Q8BGT7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smndc1Q8BGT7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smndc1Q8BGT7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Smndc1Q8BGT7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Smndc1Q8BGT7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smndc1Q8BGT7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smndc1Q8BGT7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smndc1Q8BGT7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smndc1Q8BGT7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smndc1Q8BGT7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smndc1Q8BGT7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Smndc1Q8BGT7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smndc1Q8BGT7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms