Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ubp1Q811S7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubp1Q811S7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ubp1Q811S7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ubp1Q811S7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubp1Q811S7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ubp1Q811S7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.87■□□□□ 0.61
Ubp1Q811S7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubp1Q811S7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubp1Q811S7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Ubp1Q811S7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubp1Q811S7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ubp1Q811S7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ubp1Q811S7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ubp1Q811S7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.86■□□□□ 0.61
Ubp1Q811S7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubp1Q811S7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.86■□□□□ 0.61
Ubp1Q811S7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubp1Q811S7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubp1Q811S7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ubp1Q811S7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubp1Q811S7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ubp1Q811S7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubp1Q811S7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ubp1Q811S7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ubp1Q811S7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubp1Q811S7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ubp1Q811S7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubp1Q811S7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.85■□□□□ 0.61
Ubp1Q811S7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubp1Q811S7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ubp1Q811S7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.85■□□□□ 0.61
Ubp1Q811S7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ubp1Q811S7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ubp1Q811S7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ubp1Q811S7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.85■□□□□ 0.61
Ubp1Q811S7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ubp1Q811S7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ubp1Q811S7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubp1Q811S7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubp1Q811S7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.84■□□□□ 0.61
Ubp1Q811S7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubp1Q811S7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ubp1Q811S7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ubp1Q811S7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubp1Q811S7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ubp1Q811S7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubp1Q811S7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubp1Q811S7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.84■□□□□ 0.61
Ubp1Q811S7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubp1Q811S7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubp1Q811S7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ubp1Q811S7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Ubp1Q811S7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ubp1Q811S7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Ubp1Q811S7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ubp1Q811S7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ubp1Q811S7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.83■□□□□ 0.6
Ubp1Q811S7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Ubp1Q811S7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ubp1Q811S7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubp1Q811S7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubp1Q811S7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubp1Q811S7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubp1Q811S7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubp1Q811S7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubp1Q811S7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ubp1Q811S7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ubp1Q811S7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubp1Q811S7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.82■□□□□ 0.6
Ubp1Q811S7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubp1Q811S7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubp1Q811S7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Ubp1Q811S7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.81■□□□□ 0.6
Ubp1Q811S7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.81■□□□□ 0.6
Ubp1Q811S7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubp1Q811S7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubp1Q811S7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubp1Q811S7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.81■□□□□ 0.6
Ubp1Q811S7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.81■□□□□ 0.6
Ubp1Q811S7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubp1Q811S7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubp1Q811S7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubp1Q811S7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.81■□□□□ 0.6
Ubp1Q811S7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms