Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx42Q810A7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx42Q810A7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx42Q810A7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx42Q810A7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx42Q810A7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ddx42Q810A7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx42Q810A7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx42Q810A7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ddx42Q810A7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ddx42Q810A7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx42Q810A7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx42Q810A7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx42Q810A7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ddx42Q810A7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx42Q810A7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx42Q810A7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx42Q810A7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.37■□□□□ 0.69
Ddx42Q810A7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx42Q810A7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Ddx42Q810A7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx42Q810A7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx42Q810A7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.37■□□□□ 0.69
Ddx42Q810A7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx42Q810A7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx42Q810A7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx42Q810A7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx42Q810A7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx42Q810A7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx42Q810A7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx42Q810A7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ddx42Q810A7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx42Q810A7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx42Q810A7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx42Q810A7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx42Q810A7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.35■□□□□ 0.69
Ddx42Q810A7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ddx42Q810A7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx42Q810A7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx42Q810A7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.35■□□□□ 0.69
Ddx42Q810A7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
Ddx42Q810A7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx42Q810A7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx42Q810A7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Ddx42Q810A7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx42Q810A7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ddx42Q810A7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx42Q810A7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx42Q810A7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Ddx42Q810A7 Gm9870-201ENSMUST00000063874 645 ntBASIC19.34■□□□□ 0.69
Ddx42Q810A7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx42Q810A7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx42Q810A7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx42Q810A7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ddx42Q810A7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ddx42Q810A7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx42Q810A7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx42Q810A7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Ddx42Q810A7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.33■□□□□ 0.69
Ddx42Q810A7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx42Q810A7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx42Q810A7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx42Q810A7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ddx42Q810A7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx42Q810A7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx42Q810A7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx42Q810A7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx42Q810A7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Ddx42Q810A7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Ddx42Q810A7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx42Q810A7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx42Q810A7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.33■□□□□ 0.68
Ddx42Q810A7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx42Q810A7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ddx42Q810A7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.33■□□□□ 0.68
Ddx42Q810A7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx42Q810A7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.32■□□□□ 0.68
Ddx42Q810A7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx42Q810A7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ddx42Q810A7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Ddx42Q810A7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx42Q810A7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ddx42Q810A7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx42Q810A7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx42Q810A7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ddx42Q810A7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx42Q810A7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx42Q810A7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx42Q810A7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx42Q810A7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx42Q810A7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx42Q810A7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx42Q810A7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx42Q810A7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx42Q810A7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx42Q810A7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx42Q810A7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx42Q810A7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ddx42Q810A7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx42Q810A7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms