Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm15710-201ENSMUST00000121821 636 ntBASIC18.32■□□□□ 0.52
Vrk1Q80X41 Gm5075-201ENSMUST00000196916 622 ntBASIC18.32■□□□□ 0.52
Vrk1Q80X41 Gm6365-201ENSMUST00000054711 744 ntBASIC18.32■□□□□ 0.52
Vrk1Q80X41 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.32■□□□□ 0.52
Vrk1Q80X41 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.32■□□□□ 0.52
Vrk1Q80X41 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vrk1Q80X41 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vrk1Q80X41 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk1Q80X41 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Vrk1Q80X41 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk1Q80X41 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk1Q80X41 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk1Q80X41 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.31■□□□□ 0.52
Vrk1Q80X41 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk1Q80X41 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.31■□□□□ 0.52
Vrk1Q80X41 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.31■□□□□ 0.52
Vrk1Q80X41 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.31■□□□□ 0.52
Vrk1Q80X41 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk1Q80X41 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk1Q80X41 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk1Q80X41 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk1Q80X41 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk1Q80X41 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk1Q80X41 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vrk1Q80X41 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vrk1Q80X41 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vrk1Q80X41 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Vrk1Q80X41 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Vrk1Q80X41 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vrk1Q80X41 Nespas-201ENSMUST00000143738 1083 ntBASIC18.3■□□□□ 0.52
Vrk1Q80X41 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.3■□□□□ 0.52
Vrk1Q80X41 Gm6420-201ENSMUST00000193885 723 ntBASIC18.3■□□□□ 0.52
Vrk1Q80X41 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.3■□□□□ 0.52
Vrk1Q80X41 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.3■□□□□ 0.52
Vrk1Q80X41 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vrk1Q80X41 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vrk1Q80X41 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vrk1Q80X41 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Vrk1Q80X41 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vrk1Q80X41 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.3■□□□□ 0.52
Vrk1Q80X41 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vrk1Q80X41 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vrk1Q80X41 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vrk1Q80X41 Gm10653-202ENSMUST00000139570 835 ntBASIC18.29■□□□□ 0.52
Vrk1Q80X41 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Vrk1Q80X41 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Vrk1Q80X41 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vrk1Q80X41 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vrk1Q80X41 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.29■□□□□ 0.52
Vrk1Q80X41 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vrk1Q80X41 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vrk1Q80X41 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vrk1Q80X41 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Vrk1Q80X41 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.28■□□□□ 0.52
Vrk1Q80X41 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vrk1Q80X41 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vrk1Q80X41 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vrk1Q80X41 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vrk1Q80X41 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vrk1Q80X41 Gm13148-201ENSMUST00000118892 745 ntBASIC18.28■□□□□ 0.52
Vrk1Q80X41 Gm13534-201ENSMUST00000121169 513 ntBASIC18.28■□□□□ 0.52
Vrk1Q80X41 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vrk1Q80X41 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vrk1Q80X41 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Vrk1Q80X41 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.28■□□□□ 0.52
Vrk1Q80X41 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vrk1Q80X41 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vrk1Q80X41 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.28■□□□□ 0.52
Vrk1Q80X41 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vrk1Q80X41 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vrk1Q80X41 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
Vrk1Q80X41 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vrk1Q80X41 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vrk1Q80X41 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vrk1Q80X41 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vrk1Q80X41 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Vrk1Q80X41 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vrk1Q80X41 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.27■□□□□ 0.52
Vrk1Q80X41 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Vrk1Q80X41 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vrk1Q80X41 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vrk1Q80X41 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vrk1Q80X41 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vrk1Q80X41 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Vrk1Q80X41 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.26■□□□□ 0.51
Vrk1Q80X41 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vrk1Q80X41 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vrk1Q80X41 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vrk1Q80X41 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vrk1Q80X41 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vrk1Q80X41 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.26■□□□□ 0.51
Vrk1Q80X41 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.26■□□□□ 0.51
Vrk1Q80X41 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vrk1Q80X41 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vrk1Q80X41 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vrk1Q80X41 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk1Q80X41 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk1Q80X41 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Vrk1Q80X41 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk1Q80X41 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms