Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tspan18Q80WR1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tspan18Q80WR1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.5■□□□□ 0.87
Tspan18Q80WR1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tspan18Q80WR1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tspan18Q80WR1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Tspan18Q80WR1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
Tspan18Q80WR1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tspan18Q80WR1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.49■□□□□ 0.87
Tspan18Q80WR1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tspan18Q80WR1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tspan18Q80WR1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tspan18Q80WR1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tspan18Q80WR1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.48■□□□□ 0.87
Tspan18Q80WR1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Tspan18Q80WR1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tspan18Q80WR1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tspan18Q80WR1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tspan18Q80WR1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Tspan18Q80WR1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tspan18Q80WR1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tspan18Q80WR1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Tspan18Q80WR1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tspan18Q80WR1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tspan18Q80WR1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tspan18Q80WR1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.47■□□□□ 0.87
Tspan18Q80WR1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.47■□□□□ 0.87
Tspan18Q80WR1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tspan18Q80WR1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tspan18Q80WR1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tspan18Q80WR1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tspan18Q80WR1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tspan18Q80WR1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tspan18Q80WR1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.46■□□□□ 0.87
Tspan18Q80WR1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tspan18Q80WR1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tspan18Q80WR1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tspan18Q80WR1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tspan18Q80WR1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Tspan18Q80WR1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tspan18Q80WR1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tspan18Q80WR1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tspan18Q80WR1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Tspan18Q80WR1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tspan18Q80WR1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tspan18Q80WR1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Tspan18Q80WR1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.44■□□□□ 0.86
Tspan18Q80WR1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tspan18Q80WR1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Gm7290-201ENSMUST00000104990 617 ntBASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Gm12918-201ENSMUST00000120234 636 ntBASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Gm15710-201ENSMUST00000121821 636 ntBASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Gm5075-201ENSMUST00000196916 622 ntBASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Tspan18Q80WR1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.42■□□□□ 0.86
Tspan18Q80WR1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tspan18Q80WR1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Tspan18Q80WR1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tspan18Q80WR1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Tspan18Q80WR1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tspan18Q80WR1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tspan18Q80WR1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.42■□□□□ 0.86
Tspan18Q80WR1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.42■□□□□ 0.86
Tspan18Q80WR1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tspan18Q80WR1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Tspan18Q80WR1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tspan18Q80WR1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tspan18Q80WR1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tspan18Q80WR1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms