Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prpf38bQ80SY5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prpf38bQ80SY5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf38bQ80SY5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf38bQ80SY5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prpf38bQ80SY5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prpf38bQ80SY5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38bQ80SY5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.98■□□□□ 0.79
Prpf38bQ80SY5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf38bQ80SY5 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.98■□□□□ 0.79
Prpf38bQ80SY5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Prpf38bQ80SY5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.98■□□□□ 0.79
Prpf38bQ80SY5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Prpf38bQ80SY5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf38bQ80SY5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf38bQ80SY5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38bQ80SY5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38bQ80SY5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38bQ80SY5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38bQ80SY5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.97■□□□□ 0.79
Prpf38bQ80SY5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38bQ80SY5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Prpf38bQ80SY5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38bQ80SY5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.97■□□□□ 0.79
Prpf38bQ80SY5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Prpf38bQ80SY5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38bQ80SY5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Prpf38bQ80SY5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38bQ80SY5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38bQ80SY5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Prpf38bQ80SY5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf38bQ80SY5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf38bQ80SY5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Prpf38bQ80SY5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Prpf38bQ80SY5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf38bQ80SY5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf38bQ80SY5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf38bQ80SY5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
Prpf38bQ80SY5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf38bQ80SY5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf38bQ80SY5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Prpf38bQ80SY5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Prpf38bQ80SY5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Prpf38bQ80SY5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf38bQ80SY5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf38bQ80SY5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.95■□□□□ 0.78
Prpf38bQ80SY5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf38bQ80SY5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38bQ80SY5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38bQ80SY5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38bQ80SY5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38bQ80SY5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38bQ80SY5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38bQ80SY5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.94■□□□□ 0.78
Prpf38bQ80SY5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.94■□□□□ 0.78
Prpf38bQ80SY5 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.94■□□□□ 0.78
Prpf38bQ80SY5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38bQ80SY5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38bQ80SY5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38bQ80SY5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Prpf38bQ80SY5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Prpf38bQ80SY5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.93■□□□□ 0.78
Prpf38bQ80SY5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38bQ80SY5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38bQ80SY5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.93■□□□□ 0.78
Prpf38bQ80SY5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38bQ80SY5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38bQ80SY5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Prpf38bQ80SY5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38bQ80SY5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38bQ80SY5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38bQ80SY5 Reep4-203ENSMUST00000226563 1444 ntBASIC19.93■□□□□ 0.78
Prpf38bQ80SY5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms