Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ctdp1Q7TSG2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ctdp1Q7TSG2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ctdp1Q7TSG2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ctdp1Q7TSG2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ctdp1Q7TSG2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.85■□□□□ 0.93
Ctdp1Q7TSG2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ctdp1Q7TSG2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ctdp1Q7TSG2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ctdp1Q7TSG2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ctdp1Q7TSG2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ctdp1Q7TSG2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ctdp1Q7TSG2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ctdp1Q7TSG2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ctdp1Q7TSG2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.84■□□□□ 0.93
Ctdp1Q7TSG2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.84■□□□□ 0.93
Ctdp1Q7TSG2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ctdp1Q7TSG2 Gm9870-201ENSMUST00000063874 645 ntBASIC20.84■□□□□ 0.93
Ctdp1Q7TSG2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ctdp1Q7TSG2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ctdp1Q7TSG2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ctdp1Q7TSG2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ctdp1Q7TSG2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ctdp1Q7TSG2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ctdp1Q7TSG2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ctdp1Q7TSG2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Ctdp1Q7TSG2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.83■□□□□ 0.93
Ctdp1Q7TSG2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ctdp1Q7TSG2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Ctdp1Q7TSG2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Ctdp1Q7TSG2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ctdp1Q7TSG2 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.83■□□□□ 0.92
Ctdp1Q7TSG2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdp1Q7TSG2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdp1Q7TSG2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdp1Q7TSG2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ctdp1Q7TSG2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdp1Q7TSG2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdp1Q7TSG2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdp1Q7TSG2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdp1Q7TSG2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.82■□□□□ 0.92
Ctdp1Q7TSG2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
Ctdp1Q7TSG2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdp1Q7TSG2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdp1Q7TSG2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ctdp1Q7TSG2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ctdp1Q7TSG2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ctdp1Q7TSG2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ctdp1Q7TSG2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ctdp1Q7TSG2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ctdp1Q7TSG2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ctdp1Q7TSG2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.81■□□□□ 0.92
Ctdp1Q7TSG2 Golgb1-201ENSMUST00000023534 498 ntBASIC20.81■□□□□ 0.92
Ctdp1Q7TSG2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ctdp1Q7TSG2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ctdp1Q7TSG2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Ctdp1Q7TSG2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Ctdp1Q7TSG2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Ctdp1Q7TSG2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdp1Q7TSG2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdp1Q7TSG2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.8■□□□□ 0.92
Ctdp1Q7TSG2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ctdp1Q7TSG2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Ctdp1Q7TSG2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdp1Q7TSG2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ctdp1Q7TSG2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdp1Q7TSG2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdp1Q7TSG2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ctdp1Q7TSG2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ctdp1Q7TSG2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdp1Q7TSG2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdp1Q7TSG2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdp1Q7TSG2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdp1Q7TSG2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdp1Q7TSG2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.79■□□□□ 0.92
Ctdp1Q7TSG2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdp1Q7TSG2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdp1Q7TSG2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ctdp1Q7TSG2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ctdp1Q7TSG2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ctdp1Q7TSG2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.78■□□□□ 0.92
Ctdp1Q7TSG2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.78■□□□□ 0.92
Ctdp1Q7TSG2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ctdp1Q7TSG2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ctdp1Q7TSG2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ctdp1Q7TSG2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ctdp1Q7TSG2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ctdp1Q7TSG2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ctdp1Q7TSG2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ctdp1Q7TSG2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ctdp1Q7TSG2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.78■□□□□ 0.92
Ctdp1Q7TSG2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctdp1Q7TSG2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Ctdp1Q7TSG2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctdp1Q7TSG2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctdp1Q7TSG2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctdp1Q7TSG2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.77■□□□□ 0.92
Ctdp1Q7TSG2 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms