Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim17Q7TPM3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim17Q7TPM3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim17Q7TPM3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trim17Q7TPM3 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.86■□□□□ 0.77
Trim17Q7TPM3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim17Q7TPM3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trim17Q7TPM3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim17Q7TPM3 Gm13146-201ENSMUST00000118508 780 ntBASIC19.86■□□□□ 0.77
Trim17Q7TPM3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim17Q7TPM3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim17Q7TPM3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim17Q7TPM3 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.86■□□□□ 0.77
Trim17Q7TPM3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim17Q7TPM3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim17Q7TPM3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim17Q7TPM3 Gm13168-201ENSMUST00000121771 632 ntBASIC19.85■□□□□ 0.77
Trim17Q7TPM3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.85■□□□□ 0.77
Trim17Q7TPM3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim17Q7TPM3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim17Q7TPM3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim17Q7TPM3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim17Q7TPM3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim17Q7TPM3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim17Q7TPM3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.84■□□□□ 0.77
Trim17Q7TPM3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim17Q7TPM3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim17Q7TPM3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim17Q7TPM3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim17Q7TPM3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.84■□□□□ 0.77
Trim17Q7TPM3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim17Q7TPM3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim17Q7TPM3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.84■□□□□ 0.77
Trim17Q7TPM3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trim17Q7TPM3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trim17Q7TPM3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim17Q7TPM3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim17Q7TPM3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim17Q7TPM3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Trim17Q7TPM3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim17Q7TPM3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trim17Q7TPM3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Trim17Q7TPM3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim17Q7TPM3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.83■□□□□ 0.76
Trim17Q7TPM3 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.83■□□□□ 0.76
Trim17Q7TPM3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim17Q7TPM3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim17Q7TPM3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trim17Q7TPM3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim17Q7TPM3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim17Q7TPM3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Trim17Q7TPM3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim17Q7TPM3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.82■□□□□ 0.76
Trim17Q7TPM3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim17Q7TPM3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim17Q7TPM3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim17Q7TPM3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim17Q7TPM3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim17Q7TPM3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim17Q7TPM3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim17Q7TPM3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim17Q7TPM3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim17Q7TPM3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim17Q7TPM3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Trim17Q7TPM3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim17Q7TPM3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim17Q7TPM3 Mir7071-201ENSMUST00000184847 69 ntBASIC19.81■□□□□ 0.76
Trim17Q7TPM3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.81■□□□□ 0.76
Trim17Q7TPM3 Gm20049-201ENSMUST00000219950 730 ntBASIC19.81■□□□□ 0.76
Trim17Q7TPM3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Trim17Q7TPM3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim17Q7TPM3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trim17Q7TPM3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim17Q7TPM3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim17Q7TPM3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.8■□□□□ 0.76
Trim17Q7TPM3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim17Q7TPM3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim17Q7TPM3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim17Q7TPM3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.8■□□□□ 0.76
Trim17Q7TPM3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.8■□□□□ 0.76
Trim17Q7TPM3 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.8■□□□□ 0.76
Trim17Q7TPM3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trim17Q7TPM3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim17Q7TPM3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim17Q7TPM3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim17Q7TPM3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim17Q7TPM3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim17Q7TPM3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.79■□□□□ 0.76
Trim17Q7TPM3 Gm38205-201ENSMUST00000192243 258 ntBASIC19.79■□□□□ 0.76
Trim17Q7TPM3 Gm6420-201ENSMUST00000193885 723 ntBASIC19.79■□□□□ 0.76
Trim17Q7TPM3 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.79■□□□□ 0.76
Trim17Q7TPM3 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.79■□□□□ 0.76
Trim17Q7TPM3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim17Q7TPM3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim17Q7TPM3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim17Q7TPM3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim17Q7TPM3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim17Q7TPM3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.78■□□□□ 0.76
Trim17Q7TPM3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim17Q7TPM3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms