Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn4bQ7M729 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Scn4bQ7M729 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn4bQ7M729 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Scn4bQ7M729 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn4bQ7M729 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn4bQ7M729 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn4bQ7M729 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Scn4bQ7M729 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn4bQ7M729 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.66■□□□□ 0.58
Scn4bQ7M729 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Scn4bQ7M729 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn4bQ7M729 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn4bQ7M729 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn4bQ7M729 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn4bQ7M729 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn4bQ7M729 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn4bQ7M729 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn4bQ7M729 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn4bQ7M729 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Scn4bQ7M729 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn4bQ7M729 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Scn4bQ7M729 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn4bQ7M729 Gm11421-201ENSMUST00000122124 294 ntBASIC18.65■□□□□ 0.58
Scn4bQ7M729 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Scn4bQ7M729 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Scn4bQ7M729 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn4bQ7M729 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Scn4bQ7M729 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.58
Scn4bQ7M729 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn4bQ7M729 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn4bQ7M729 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scn4bQ7M729 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Scn4bQ7M729 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.64■□□□□ 0.57
Scn4bQ7M729 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Scn4bQ7M729 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Scn4bQ7M729 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.64■□□□□ 0.57
Scn4bQ7M729 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.64■□□□□ 0.57
Scn4bQ7M729 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn4bQ7M729 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scn4bQ7M729 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Scn4bQ7M729 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn4bQ7M729 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn4bQ7M729 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn4bQ7M729 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn4bQ7M729 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn4bQ7M729 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn4bQ7M729 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn4bQ7M729 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Scn4bQ7M729 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
Scn4bQ7M729 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.63■□□□□ 0.57
Scn4bQ7M729 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn4bQ7M729 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.63■□□□□ 0.57
Scn4bQ7M729 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn4bQ7M729 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn4bQ7M729 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn4bQ7M729 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Scn4bQ7M729 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Scn4bQ7M729 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn4bQ7M729 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn4bQ7M729 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn4bQ7M729 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn4bQ7M729 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.62■□□□□ 0.57
Scn4bQ7M729 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn4bQ7M729 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Scn4bQ7M729 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn4bQ7M729 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn4bQ7M729 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn4bQ7M729 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn4bQ7M729 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn4bQ7M729 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Scn4bQ7M729 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn4bQ7M729 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn4bQ7M729 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn4bQ7M729 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Scn4bQ7M729 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn4bQ7M729 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn4bQ7M729 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.6■□□□□ 0.57
Scn4bQ7M729 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn4bQ7M729 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn4bQ7M729 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Scn4bQ7M729 Gm43017-201ENSMUST00000198296 752 ntBASIC18.6■□□□□ 0.57
Scn4bQ7M729 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Scn4bQ7M729 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn4bQ7M729 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Scn4bQ7M729 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn4bQ7M729 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.6■□□□□ 0.57
Scn4bQ7M729 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.6■□□□□ 0.57
Scn4bQ7M729 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn4bQ7M729 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
Scn4bQ7M729 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Scn4bQ7M729 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn4bQ7M729 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn4bQ7M729 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn4bQ7M729 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn4bQ7M729 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.59■□□□□ 0.57
Scn4bQ7M729 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.59■□□□□ 0.57
Scn4bQ7M729 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn4bQ7M729 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn4bQ7M729 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms