Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubfd1Q78JW9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubfd1Q78JW9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubfd1Q78JW9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubfd1Q78JW9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubfd1Q78JW9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Ubfd1Q78JW9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ubfd1Q78JW9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ubfd1Q78JW9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ubfd1Q78JW9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ubfd1Q78JW9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ubfd1Q78JW9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubfd1Q78JW9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubfd1Q78JW9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubfd1Q78JW9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubfd1Q78JW9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubfd1Q78JW9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ubfd1Q78JW9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.72■□□□□ 0.59
Ubfd1Q78JW9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubfd1Q78JW9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ubfd1Q78JW9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Ubfd1Q78JW9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.71■□□□□ 0.59
Ubfd1Q78JW9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubfd1Q78JW9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ubfd1Q78JW9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ubfd1Q78JW9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubfd1Q78JW9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubfd1Q78JW9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubfd1Q78JW9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubfd1Q78JW9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubfd1Q78JW9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ubfd1Q78JW9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubfd1Q78JW9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubfd1Q78JW9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.7■□□□□ 0.58
Ubfd1Q78JW9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.7■□□□□ 0.58
Ubfd1Q78JW9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubfd1Q78JW9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubfd1Q78JW9 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.7■□□□□ 0.58
Ubfd1Q78JW9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubfd1Q78JW9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubfd1Q78JW9 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.68■□□□□ 0.58
Ubfd1Q78JW9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ubfd1Q78JW9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubfd1Q78JW9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubfd1Q78JW9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.68■□□□□ 0.58
Ubfd1Q78JW9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubfd1Q78JW9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ubfd1Q78JW9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubfd1Q78JW9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubfd1Q78JW9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubfd1Q78JW9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubfd1Q78JW9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubfd1Q78JW9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubfd1Q78JW9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ubfd1Q78JW9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubfd1Q78JW9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubfd1Q78JW9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubfd1Q78JW9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubfd1Q78JW9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.66■□□□□ 0.58
Ubfd1Q78JW9 Mir5133-201ENSMUST00000174955 77 ntBASIC18.66■□□□□ 0.58
Ubfd1Q78JW9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.66■□□□□ 0.58
Ubfd1Q78JW9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.66■□□□□ 0.58
Ubfd1Q78JW9 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.66■□□□□ 0.58
Ubfd1Q78JW9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ubfd1Q78JW9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ubfd1Q78JW9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubfd1Q78JW9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.66■□□□□ 0.58
Ubfd1Q78JW9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.66■□□□□ 0.58
Ubfd1Q78JW9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.65■□□□□ 0.58
Ubfd1Q78JW9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubfd1Q78JW9 Gm6420-201ENSMUST00000193885 723 ntBASIC18.65■□□□□ 0.58
Ubfd1Q78JW9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubfd1Q78JW9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubfd1Q78JW9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ubfd1Q78JW9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubfd1Q78JW9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubfd1Q78JW9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubfd1Q78JW9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubfd1Q78JW9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ubfd1Q78JW9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Ubfd1Q78JW9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.58
Ubfd1Q78JW9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ubfd1Q78JW9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ubfd1Q78JW9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms