Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cspg5Q71M36 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cspg5Q71M36 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cspg5Q71M36 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cspg5Q71M36 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cspg5Q71M36 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cspg5Q71M36 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cspg5Q71M36 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.83■□□□□ 0.76
Cspg5Q71M36 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cspg5Q71M36 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cspg5Q71M36 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cspg5Q71M36 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cspg5Q71M36 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cspg5Q71M36 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cspg5Q71M36 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cspg5Q71M36 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cspg5Q71M36 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cspg5Q71M36 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cspg5Q71M36 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cspg5Q71M36 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cspg5Q71M36 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cspg5Q71M36 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cspg5Q71M36 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cspg5Q71M36 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cspg5Q71M36 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cspg5Q71M36 Gm27801-201ENSMUST00000184174 223 ntBASIC19.81■□□□□ 0.76
Cspg5Q71M36 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cspg5Q71M36 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cspg5Q71M36 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cspg5Q71M36 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cspg5Q71M36 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cspg5Q71M36 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cspg5Q71M36 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cspg5Q71M36 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cspg5Q71M36 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cspg5Q71M36 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cspg5Q71M36 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cspg5Q71M36 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cspg5Q71M36 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.8■□□□□ 0.76
Cspg5Q71M36 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cspg5Q71M36 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.8■□□□□ 0.76
Cspg5Q71M36 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cspg5Q71M36 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.8■□□□□ 0.76
Cspg5Q71M36 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cspg5Q71M36 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cspg5Q71M36 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cspg5Q71M36 Gm12441-201ENSMUST00000121806 588 ntBASIC19.79■□□□□ 0.76
Cspg5Q71M36 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.79■□□□□ 0.76
Cspg5Q71M36 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cspg5Q71M36 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cspg5Q71M36 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cspg5Q71M36 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cspg5Q71M36 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cspg5Q71M36 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cspg5Q71M36 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cspg5Q71M36 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cspg5Q71M36 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cspg5Q71M36 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cspg5Q71M36 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.78■□□□□ 0.76
Cspg5Q71M36 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cspg5Q71M36 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cspg5Q71M36 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.78■□□□□ 0.76
Cspg5Q71M36 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Cspg5Q71M36 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cspg5Q71M36 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cspg5Q71M36 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cspg5Q71M36 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cspg5Q71M36 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cspg5Q71M36 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cspg5Q71M36 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cspg5Q71M36 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cspg5Q71M36 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.77■□□□□ 0.76
Cspg5Q71M36 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cspg5Q71M36 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cspg5Q71M36 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cspg5Q71M36 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cspg5Q71M36 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cspg5Q71M36 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cspg5Q71M36 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cspg5Q71M36 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Cspg5Q71M36 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cspg5Q71M36 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cspg5Q71M36 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cspg5Q71M36 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cspg5Q71M36 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cspg5Q71M36 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cspg5Q71M36 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cspg5Q71M36 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cspg5Q71M36 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cspg5Q71M36 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.76■□□□□ 0.75
Cspg5Q71M36 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cspg5Q71M36 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cspg5Q71M36 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cspg5Q71M36 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cspg5Q71M36 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Cspg5Q71M36 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.75■□□□□ 0.75
Cspg5Q71M36 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.75■□□□□ 0.75
Cspg5Q71M36 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Cspg5Q71M36 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cspg5Q71M36 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms