Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx58Q6Q899 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx58Q6Q899 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx58Q6Q899 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.85■■□□□ 1.41
Ddx58Q6Q899 Nespas-201ENSMUST00000143738 1083 ntBASIC23.85■■□□□ 1.41
Ddx58Q6Q899 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ddx58Q6Q899 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Ddx58Q6Q899 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Ddx58Q6Q899 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Ddx58Q6Q899 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ddx58Q6Q899 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Ddx58Q6Q899 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx58Q6Q899 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx58Q6Q899 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx58Q6Q899 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx58Q6Q899 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx58Q6Q899 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx58Q6Q899 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx58Q6Q899 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx58Q6Q899 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC23.84■■□□□ 1.41
Ddx58Q6Q899 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx58Q6Q899 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx58Q6Q899 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC23.84■■□□□ 1.41
Ddx58Q6Q899 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Ddx58Q6Q899 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx58Q6Q899 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx58Q6Q899 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx58Q6Q899 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx58Q6Q899 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx58Q6Q899 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Ddx58Q6Q899 Gm7290-201ENSMUST00000104990 617 ntBASIC23.83■■□□□ 1.41
Ddx58Q6Q899 Gm12918-201ENSMUST00000120234 636 ntBASIC23.83■■□□□ 1.41
Ddx58Q6Q899 Gm15710-201ENSMUST00000121821 636 ntBASIC23.83■■□□□ 1.41
Ddx58Q6Q899 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC23.83■■□□□ 1.41
Ddx58Q6Q899 Gm5075-201ENSMUST00000196916 622 ntBASIC23.83■■□□□ 1.41
Ddx58Q6Q899 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC23.83■■□□□ 1.41
Ddx58Q6Q899 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx58Q6Q899 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.83■■□□□ 1.41
Ddx58Q6Q899 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.83■■□□□ 1.41
Ddx58Q6Q899 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
Ddx58Q6Q899 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx58Q6Q899 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx58Q6Q899 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx58Q6Q899 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx58Q6Q899 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx58Q6Q899 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC23.82■■□□□ 1.4
Ddx58Q6Q899 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Ddx58Q6Q899 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx58Q6Q899 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx58Q6Q899 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx58Q6Q899 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC23.81■■□□□ 1.4
Ddx58Q6Q899 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx58Q6Q899 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx58Q6Q899 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.81■■□□□ 1.4
Ddx58Q6Q899 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx58Q6Q899 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx58Q6Q899 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx58Q6Q899 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx58Q6Q899 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx58Q6Q899 Gm6365-201ENSMUST00000054711 744 ntBASIC23.8■■□□□ 1.4
Ddx58Q6Q899 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.8■■□□□ 1.4
Ddx58Q6Q899 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx58Q6Q899 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.8■■□□□ 1.4
Ddx58Q6Q899 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx58Q6Q899 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
Ddx58Q6Q899 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Ddx58Q6Q899 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx58Q6Q899 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx58Q6Q899 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC23.79■■□□□ 1.4
Ddx58Q6Q899 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx58Q6Q899 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx58Q6Q899 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx58Q6Q899 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx58Q6Q899 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx58Q6Q899 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Ddx58Q6Q899 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC23.78■■□□□ 1.4
Ddx58Q6Q899 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx58Q6Q899 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx58Q6Q899 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx58Q6Q899 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx58Q6Q899 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx58Q6Q899 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Ddx58Q6Q899 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx58Q6Q899 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Ddx58Q6Q899 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx58Q6Q899 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC23.77■■□□□ 1.4
Ddx58Q6Q899 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC23.77■■□□□ 1.4
Ddx58Q6Q899 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx58Q6Q899 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Ddx58Q6Q899 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx58Q6Q899 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx58Q6Q899 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx58Q6Q899 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx58Q6Q899 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
Ddx58Q6Q899 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx58Q6Q899 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx58Q6Q899 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx58Q6Q899 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx58Q6Q899 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx58Q6Q899 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms